Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009305071.2 | Gene: | grin2cb / 100333648 | ZFINID: | ZDB-GENE-100308-2 | Length: | 1328 | Species: | Danio rerio |
Alignment Length: | 990 | Identity: | 226/990 - (22%) |
---|---|---|---|
Similarity: | 404/990 - (40%) | Gaps: | 194/990 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 SFPLGFILTSLLLAFPGCRGE------RTNVGLVYENTDPDLEKIFHLAISKANEENEDLQLHGV 70
Fly 71 SVSIEPGNSFETSKKLCK-MLRQNLVAVFGPTSNLAARHAMSICD-------AKELPFLDTRWDF 127
Fly 128 GAQLPTINLH-------PHPA------TLGVALRDMVVAL-------GWESFTII------YESG 166
Fly 167 EYLPTVRELLQMYGTAGPTVTVRRYELDLNGNYRNVLRRIRNADDFSFVVVGSMATLPEFFKQAQ 231
Fly 232 QVGLVTSDYRYIIGNLDWHTMDLEPYQHAGTNITGLRLVSPDSEQVQEVA-------KALYESEE 289
Fly 290 PFQNVSCPLTNSMALVYDGVQLLAETYKHVNFRPVALSCNDDSAWDKGY---TLVNYMKSLTLNG 351
Fly 352 LTGPIRFDYEGLRTDFKLEVIEL-AVSGMQKIGQWSGEDGFQENR----PAPAHSLEP--DMR-- 407
Fly 408 ---SLVNKSFVVITAISEPYG-MLKET---------SEKLEGNDQ------FEGFGIELIDELSK 453
Fly 454 KLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLG 518
Fly 519 IGILF-RKPMKEPPKLFSFMSPFSGEVWLWLGLAYMG-VSISMFVLGRLSPAEWDNPYPCIEEPT 581
Fly 582 ELENQFSFANCLWFSIGALLQQGSELA-PKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESL 645
Fly 646 VTPINDADDLSKNKGGVNY-----GAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEG 705
Fly 706 VDRVENSNY-----AFLMESTTIEYIT--ERRCTLTQVGA--LLDEKGYGIAMRKNWPYRDTLSQ 761
Fly 762 AVLEMQEQGLLTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLL 826
Fly 827 EMVLGVKERSDENQVSFKTELLDEI----RFILQC------SGNTKAVKYP---KNSSRSN---- 874
Fly 875 -ASSKSKGSSMSVDS 888 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 72/398 (18%) |
ANF_receptor | 53..374 | CDD:279440 | 66/364 (18%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 106/402 (26%) | ||
Lig_chan | 543..816 | CDD:278489 | 70/288 (24%) | ||
grin2cb | XP_009305071.2 | PBP1_iGluR_NMDA_NR2 | 37..396 | CDD:107373 | 76/413 (18%) |
PBP2_iGluR_NMDA_Nr2 | 407..808 | CDD:270436 | 110/422 (26%) | ||
NMDAR2_C | 845..>932 | CDD:313729 | 17/79 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591317 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |