Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004912781.1 | Gene: | gria1 / 100127569 | XenbaseID: | XB-GENE-995621 | Length: | 903 | Species: | Xenopus tropicalis |
Alignment Length: | 944 | Identity: | 299/944 - (31%) |
---|---|---|---|
Similarity: | 481/944 - (50%) | Gaps: | 101/944 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 MISTEASFPLGFILTSLLLAFPGCRGERTNVGLVYENTDPDLEKIFHLAISKANEENEDL-QLHG 69
Fly 70 VSVSIEPGNSFETSKKLCKMLRQNLVAVFGPTSNLAARHAMSICDAKELPFLDTRWDFGAQLPTI 134
Fly 135 NLHPHPATLGVALRDMVVAL----GWESFTIIYESGEYLPTVRELLQMYGTAGPTVTVRRYELDL 195
Fly 196 NGNYRNVLRRIRNADDFSFVV------VGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDWHTMDL 254
Fly 255 EPYQHAGTNITGLRLVSPDSEQVQEVAKAL--YES-EEPFQNVSCPLTNSMALVYDGVQLLAETY 316
Fly 317 KHVNFRPVALS---------CNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKLEVI 372
Fly 373 ELAVSGMQKIGQWSGEDGFQENRPAPAHSLEP---------DMRSLVNKSFVVITAISEPYGMLK 428
Fly 429 ETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADM 493
Fly 494 GITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGEVWLWLGLAYMGVSIS 558
Fly 559 MFVLGRLSPAEWDNPYPCIEE-----PTELENQFSFANCLWFSIGALLQQGSELAPKAYSTRAVA 618
Fly 619 ASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIGGATFNFFKESNYPT 683
Fly 684 YQRMYEFMRD-NPQYMTNTNQEGVDRVENS--NYAFLMESTTIEYITERR-CTLTQVGALLDEKG 744
Fly 745 YGIAMRKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACSDADEDSGA----VALEISN 805
Fly 806 LGGVFLVMGVGSFFGIFVSLLEMVLGVKERSDENQVSF-----KTELLDEIRFILQC-------- 857
Fly 858 --SGNTKAVKYPKNSSRSNASSKSKGSSMSVDSL 889 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 86/376 (23%) |
ANF_receptor | 53..374 | CDD:279440 | 77/343 (22%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 174/378 (46%) | ||
Lig_chan | 543..816 | CDD:278489 | 129/285 (45%) | ||
gria1 | XP_004912781.1 | PBP1_iGluR_AMPA_GluR1 | 26..393 | CDD:380613 | 88/393 (22%) |
PBP2_iGluR_AMPA_GluR1 | 407..788 | CDD:270447 | 177/386 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |