DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ktl and Kctd12

DIOPT Version :9

Sequence 1:NP_001303467.1 Gene:Ktl / 42475 FlyBaseID:FBgn0038839 Length:228 Species:Drosophila melanogaster
Sequence 2:XP_006252482.1 Gene:Kctd12 / 364458 RGDID:1309421 Length:327 Species:Rattus norvegicus


Alignment Length:299 Identity:113/299 - (37%)
Similarity:153/299 - (51%) Gaps:76/299 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PEIIELNVGGVSYTTTLATLLQDKSTLLAELFGEGR-DSLAKDSKGRYFLDRDGVLFRYILDFLR 65
            |:|:||||||..|.|...|::....:||..:|.:.: ..||:|||||:||||||.|||||||:||
  Rat    33 PDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLR 97

  Fly    66 DKALHLPEGFRERQRLLREAEHFKLTAMLECI--------------------------------- 97
            |..|.||:.|.||.||.||||:|:|..::..:                                 
  Rat    98 DLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQPGPGPPPPHSRRGVHKEGSLGDELLPLG 162

  Fly    98 --------------------------------------RSERDARPPGCITIGYRGSFQFGKDGL 124
                                                  :|...:|..|.||||||||:..|:|..
  Rat   163 YAEPEPQEGASAGAPSPTLDLASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQ 227

  Fly   125 ADVKFRKLSRILVCGRVAQCREVFGDTLNESRDPDHGGTDRYTSRFFLKHCYIEQAFDNLHDHGY 189
            ||.|||:::||.|||:.:..:||||||||||||||. ..:|||||::||..::|||||.|.:.|:
  Rat   228 ADAKFRRVARITVCGKTSLAKEVFGDTLNESRDPDR-PPERYTSRYYLKFNFLEQAFDKLSESGF 291

  Fly   190 RMAGSCGSGTAGSAAEPKPGVDTEENRWNHYNEFVFIRD 228
            .|.....:||...|:...   .:|:..|..|.|:||.|:
  Rat   292 HMVACSSTGTCAFASSTD---QSEDKIWTSYTEYVFCRE 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KtlNP_001303467.1 BTB 5..97 CDD:197585 49/92 (53%)
BTB 5..91 CDD:295341 48/86 (56%)
Kctd12XP_006252482.1 BTB_POZ_KCTD12_Pfetin 32..131 CDD:349705 51/97 (53%)
H1_KCTD12 208..327 CDD:409028 59/122 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1579292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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