DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TotB and TotC

DIOPT Version :10

Sequence 1:NP_524422.1 Gene:TotB / 42474 FlyBaseID:FBgn0038838 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_536779.2 Gene:TotC / 117462 FlyBaseID:FBgn0044812 Length:129 Species:Drosophila melanogaster


Alignment Length:128 Identity:68/128 - (53%)
Similarity:91/128 - (71%) Gaps:1/128 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNFKTSLICFALLLIGTLCSAYSNQERQRDSRRVAEIMRTSWDDNTKIKRIQELLTIYNRMAPSL 65
            ||...||:|.|||||...|..||::||:.||.|||||:|||.|..:||.|.||||.|:.|:.|:|
  Fly     1 MNASISLLCLALLLISPFCLGYSDEERESDSLRVAEIIRTSNDAESKINRTQELLDIFRRLTPTL 65

  Fly    66 RPDERARMDRFISGYTGEIMVDGVPSQGGAR-RIFKKILSPAAKSVATGFFTELGASLASILT 127
            .|::|.:::|.|..:|.||::||||||||.: :...|||||.|:.:|.|||.|||.||:.:.|
  Fly    66 SPEQREKIERSIQEHTDEILIDGVPSQGGRKTKYVGKILSPVAQGLAVGFFEELGGSLSRLFT 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TotBNP_524422.1 Turandot 41..116 CDD:399906 37/75 (49%)
TotCNP_536779.2 Turandot 41..117 CDD:399906 37/75 (49%)

Return to query results.
Submit another query.