Protein Alignment KaiR1D and GLUR2

DIOPT Version :10

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: NP_567981.1
• Gene: GLUR2 / 829682
• AraportID: AT4G35290
• Length: 912
• Species: Arabidopsis thaliana
• Alignment Length: 909
• Identity: 202/909 - (22%)
• Similarity: 358/909 - (39%)
• Gaps: 183/909 - (20%)

  Fly    27 PDIIKIGGLFHPADDHQE---LAFRQAVDRINADRSILPRSKLVAQIERISPFDSFHAG-KRVCG 87
            |..:.:|.:|.......|   :|.:.|.:.:|:|.|.|..|||     ||:.:|:...| ..:.|
plant    27 PRYVDVGAIFSLGTLQGEVTNIAMKAAEEDVNSDPSFLGGSKL-----RITTYDAKRNGFLTIMG 86

  Fly    88 LLNI---GVAAIFGPQSS---HTASHVQSICDNMEIPHLE-NRWDYRLRRESCL-----VNLYPH 140
            .|..   ...||.|||:|   |..||   :.:.:.:|.|. ...|..|   |.|     |...|.
plant    87 ALQFMETDAVAIIGPQTSIMAHVLSH---LANELSVPMLSFTALDPSL---SALQFPFFVQTAPS 145

  Fly   141 PNTLSKAYVDIVRHWGWKTFTIIYENND----GIVRLQELLKAH-------GMTPFPITV---RQ 191
            ...|.:|..:::.::||.....:|.::|    ||..|.:.|:..       .:.|..:.:   |:
plant   146 DLFLMRAIAEMISYYGWSEVIALYNDDDNSRNGITALGDELEGRRCKISYKAVLPLDVVITSPRE 210

  Fly   192 LSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYL----VTSLDLHTVN 252
            :.:.      |.:|:......|:::...:...::.::||::|||...:.::    :||| |.:||
plant   211 IINE------LVKIQGMESRVIIVNTFPKTGKKIFEEAQKLGMMEKGYVWIATTWLTSL-LDSVN 268

  Fly   253 ------LDEFRYGGTNITGFRLINEKIVSDVVRQWSIDEKGLLRSANLTTVRSETAL-MYDAVHL 310
                  .:..|  |.........|.|...|.|.:|:       :.:|.|...:...| .||.|.:
plant   269 PLPAKTAESLR--GVLTLRIHTPNSKKKKDFVARWN-------KLSNGTVGLNVYGLYAYDTVWI 324

  Fly   311 FAKALHD-LDTSQQIDIH------------PISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKF- 361
            .|:|:.. ||:...|...            .::....|.:..|...::|:....|.|:|..|:|
plant   325 IARAVKRLLDSRANISFSSDPKLTSMKGGGSLNLGALSIFDQGSQFLDYIVNTNMTGVTGQIQFL 389

  Fly   362 -DHQGFRTDFMLDIVELTPAGIRKIGTW-----------------------------NSTLPDGI 396
             |....:..:  ||:.:...|.|:||.|                             |.|.|.|.
plant   390 PDRSMIQPSY--DIINVVDDGFRQIGYWSNHSGLSIIPPESLYKKLSNRSSSNQHLNNVTWPGGT 452

  Fly   397 NFTR---TFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKS 458
            :.|.   .|....:.:...:.::...            ||....|.|:::.:|||:|:.....|.
plant   453 SETPRGWVFPNNGRRLRIGVPDRASF------------KEFVSRLDGSNKVQGYAIDVFEAAVKL 505

  Fly   459 LGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGV 523
            :.:....:.|..|. |..|.   .:|..:..:.....|..:.|:.|..:|.:.||||.|::..|:
plant   506 ISYPVPHEFVLFGD-GLKNP---NFNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDFTQPYIESGL 566

  Fly   524 SILYRKPI-KQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVES 587
            .::  .|: |.....::||.|.:..:|...|..:|.|..:::||.               .::..
plant   567 VVV--APVTKLNDTPWAFLRPFTPPMWAVTAAFFLIVGSVIWILE---------------HRIND 614

  Fly   588 QF------TLLNCMWFAIGSLMQQGCDFLPKALST--RMVAGIWWFFTLIMISSYTANLAAFLTV 644
            :|      .::..:||:..::.   .......:||  |.|..||.|..||:.|||||:|.:.|||
plant   615 EFRGPPRKQIVTILWFSFSTMF---FSHRENTVSTLGRAVLLIWLFVVLIITSSYTASLTSILTV 676

  Fly   645 ERMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVE 709
            ::::|||...:.|...:. :.|...|.....:..|.......|:   :....|..:.|:...|..
plant   677 QQLNSPIRGVDTLISSSG-RVGFQVGSYAENYMIDELNIARSRL---VPLGSPKEYAAALQNGTV 737

  Fly   710 RVAKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEG 774
            .....:..|..|..|....:.. |..|.|:.|       :|.|.|.:||....:::.||.|.|.|
plant   738 AAIVDERPYVDLFLSEFCGFAI-RGQEFTRSG-------WGFAFPRDSPLAIDMSTAILGLSETG 794

  Fly   775 KLHILKTKWWKEKRGGGKC-RVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWK 837
            :|..:..||...    ..| .:..|.|...:.:|.|.:..|:|:|    .|::|.||:..:.:|
plant   795 QLQKIHDKWLSR----SNCSNLNGSVSDEDSEQLKLRSFWGLFLV----CGISCFIALFIYFFK 850

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	99/453 (22%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	87/378 (23%)
GLUR2	NP_567981.1	PBP1_GABAb_receptor_plant	31..422	CDD:380645	95/419 (23%)
		GluR_Plant	466..804	CDD:270404	86/385 (22%)
		Lig_chan	587..838	CDD:459656	66/288 (23%)