Protein Alignment KaiR1D and GLR3.5

DIOPT Version :10

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: NP_001324013.1
• Gene: GLR3.5 / 817800
• AraportID: AT2G32390
• Length: 953
• Species: Arabidopsis thaliana
• Alignment Length: 930
• Identity: 225/930 - (24%)
• Similarity: 374/930 - (40%)
• Gaps: 213/930 - (22%)

  Fly    23 AQSLPDIIKIGGLFHPADDH----QELAFRQAVDRINADRSILPRSKL--VAQIERISPFDSFHA 81
            :.|||..:.:|.|| ..|..    .:|||..|::.||||:|||..:||  |.|....|.|.....
plant    41 SSSLPSSVNVGALF-TYDSFIGRAAKLAFVAAIEDINADQSILRGTKLNIVFQDTNCSGFVGTMG 104

  Fly    82 GKRVCGLLNIGVAAIFGPQSS---HTASHVQSICDNMEIPHL----------ENRWDYRLRRESC 133
            ..:   |:...|.|..|||||   |..|||   .:.:.:|.|          ..::.|.||...
plant   105 ALQ---LMENKVVAAIGPQSSGIGHIISHV---ANELHVPFLSFAATDPTLSSLQYPYFLRTTQ- 162

  Fly   134 LVNLYPHPNTLSKAYVDIVRHWGWKTFTIIYENND----GIVRLQE-LLKAHGMTPFPITVRQLS 193
              |.|...|    |..|.|.::.|:....|:.:::    ||..|.: |.|......:.......:
plant   163 --NDYFQMN----AITDFVSYFRWREVVAIFVDDEYGRNGISVLGDALAKKRAKISYKAAFPPGA 221

  Fly   194 DSGDYRPLLKQIKNSAEAHI-VLDCSTERIHEVLKQAQQIGMMSDYH-----SYLVTSLD----L 248
            |:.....||..: |..|:.| |:..:.:....:...|:.:|||...:     .:|:|:||    |
plant   222 DNSSISDLLASV-NLMESRIFVVHVNPDSGLNIFSVAKSLGMMGSGYVWITTDWLLTALDSMEPL 285

  Fly   249 HTVNLDEFRYGGTNITGFRLINEKIVSDVVRQWSIDEKGLLRSANLTT---VRSETALMYDAVHL 310
            ....||..:    .:..||....:  ||..||:....|.|....:|.:   ..|.....||:|.|
plant   286 DPRALDLLQ----GVVAFRHYTPE--SDNKRQFKGRWKNLRFKESLKSDDGFNSYALYAYDSVWL 344

  Fly   311 FAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLIN-------------------YMKIV-EMK-- 353
            .|:|| |:..||...:         |:.:..||.|                   ::::: ||.
plant   345 VARAL-DVFFSQGNTV---------TFSNDPSLRNTNDSGIKLSKLHIFNEGERFLQVILEMNYT 399

  Fly   354 GLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNS----------TLPDGINFTRTFSQKQQE 408
            |||..|:|:.:..|.:...||:.:...|..::|.|::          ||....:.|....|:..|
plant   400 GLTGQIEFNSEKNRINPAYDILNIKSTGPLRVGYWSNHTGFSVAPPETLYSKPSNTSAKDQRLNE 464

  Fly   409 I----------------EANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISK 457
            |                |.....|..|...:....|..:.::  ||.    .:|:.:|:
plant   465 IIWPGEVIKPPRGWVFPENGKPLKIGVPNRVSYKNYASKDKN--PLG----VKGFCIDI------ 517

  Fly   458 SLGFNYKIQLVP-----------DGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQA 511
               |...|||:|           ||      |....::.:|.|:.....|:|:.|:||...|.:.
plant   518 ---FEAAIQLLPYPVPRTYILYGDG------KKNPSYDNLISEVAANIFDVAVGDVTIITNRTKF 573

  Fly   512 VDFTTPFMNLGVSILYRKPIK-QPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWP 575
            ||||.||:..|:.::  .|:| ...:.:|||.|.::::|......:|.|..:::||.
plant   574 VDFTQPFIESGLVVV--APVKGAKSSPWSFLKPFTIEMWAVTGALFLFVGAVIWILE-------- 628

  Fly   576 AYTDAHGEKVESQF------TLLNCMWFAIGSLMQQGCDFLPKALST--RMVAGIWWFFTLIMIS 632
                   .:...:|      .::...||:..::.   .......:||  |.|..:|.|..||:.|
plant   629 -------HRFNEEFRGPPRRQIITVFWFSFSTMF---FSHRENTVSTLGRFVLLVWLFVVLIINS 683

  Fly   633 SYTANLAAFLTVERMDSPIESAEDL-AKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFME--- 693
            ||||:|.:.|||:::.|.||..:.| |....|   .::.|:.|              |.|:.
plant   684 SYTASLTSILTVQQLTSRIEGMDTLIASNEPI---GVQDGTFA--------------WKFLVNEL 731

  Fly   694 SARPSVFTASNGE-----GVERVAKGKGSYAFLMESTSIE-YVTERNCELTQVGGMLDTKSYGIA 752
            :..||.......|     .::|..:|.|..|.:.|...|: .::..||:...||.......:|.|
plant   732 NIAPSRIIPLKDEEEYLSALQRGPRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGFA 796

  Fly   753 TPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVFV 817
            ...:||....:::.||:|.|||||..::.||.....   :|.::.|.:.:  .::.:.:..|:|:
plant   797 FQRDSPLAVDMSTAILQLAEEGKLEKIRKKWLTYDH---ECTMQISDTEN--YQISVQSFWGLFL 856

  Fly   818 VLMGGMGVACVIAVCEFVWK 837
            :    .||...||:..|.||
plant   857 I----CGVVWFIALTLFCWK 872

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	108/437 (25%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	98/399 (25%)
GLR3.5	NP_001324013.1	PBP1_GABAb_receptor_plant	49..444	CDD:380645	106/425 (25%)
		GluR_Plant	485..828	CDD:270404	97/400 (24%)