Protein Alignment KaiR1D and GLR2.3

DIOPT Version :10

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: NP_001325281.1
• Gene: GLR2.3 / 817007
• AraportID: AT2G24710
• Length: 919
• Species: Arabidopsis thaliana
• Alignment Length: 856
• Identity: 188/856 - (21%)
• Similarity: 322/856 - (37%)
• Gaps: 206/856 - (24%)

  Fly    90 NIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWDYRLRRESCLVNLYPHPNTLSKAYVD---- 150
            |..|.||.||.:|..|..:..|.....:|.:.      ....|.::.....|..|...|.|
plant   117 NKQVKAILGPWTSMQAHFLIEIGQKSRVPIVS------YSATSPILTSLRSPYFLRATYEDSFQV 175

  Fly   151 -----IVRHWGWKTFTIIYENN---DGIV-RLQELLK------------AHGMTPFPITVRQLSD 194
                 |::.:||:....:|.:|   :||: ||.:.|:            |...|...|:|.
plant   176 QPIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISVE---- 236

  Fly   195 SGDYRPLLKQIKNSAE---AHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEF 256
                  |||.:.....   .|:..|.::    ....:|:::|:|...:.:::|:
plant   237 ------LLKMMNMPTRVFLVHMYYDLAS----RFFIKAKELGLMEPGYVWILTN----------- 280

  Fly   257 RYGGTNITGFRLINEKIVSDVVRQWSIDEKGLL-------RSANLTTVRSETALM---------- 304
               |. |....||||..|..:        :|:|       :|.:|...||....:
plant   281 ---GV-IDDLSLINETAVEAM--------EGVLGIKTYIPKSPDLEKFRSRWRSLFPRVELSVYG 333

  Fly   305 ---YDAVHLFAKALHDLDT-----SQQID----IHPISCDGQSTWQHGFSLINYMKIVEMKGLTN 357
               |||....|.|:.:..|     |:.:|    :..:...|.|  |.|..|:..:..|:.:||..
plant   334 LWAYDATTALAVAIEEAGTNNMTFSKVVDTGRNVSELEALGLS--QFGPKLLQTLLTVQFRGLAG 396

  Fly   358 VIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEA----------- 411
            ..:| .:|.....:.:||.:...|.:.||.|.    :|....:...|:...|.|
plant   397 EFRF-FRGQLQPSVFEIVNIINTGEKSIGFWK----EGNGLVKKLDQQASSISALSTWKDHLKHI 456

  Fly   412 ---------------NLKNKTLVVTTILSNPYC-MRKESAIPLSGNDQFEGYAVDLIHEISKSLG 460
                           ..|.|.|.:.......|. :.|.:..|::.:....|:.:|....:.:.|.
plant   457 VWPGEADSVPKGWQIPTKGKKLRIGVPKRTGYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELP 521

  Fly   461 FNYKIQLV----PDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNL 521
            ::...:.:    |||      |..|.:|.::.::...|.|..:.|.||...|...||||.||:..
plant   522 YDVSYEFIPFEKPDG------KTAGNYNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKS 580

  Fly   522 GVSILYR--KPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEK 584
            ||.::..  .|:|:  :...|:.|||..:|:....::..|...:::|      |:....|..|
plant   581 GVGLIVEMTDPVKR--DYILFMKPLSWKLWLTSFISFFLVGCTVWVL------EYKRNPDFSG-- 635

  Fly   585 VESQFTLLNCMWFAIGSLMQQGCDFLPK----ALSTRMVAGIWWFFTLIMISSYTANLAAFLTVE 645
             ..:|......|||..:::     |.|:    :...|.:...|:|..|::..||||:||:.||.:
plant   636 -PPRFQASTICWFAFSTMV-----FAPRERVFSFWARALVIAWYFLVLVLTQSYTASLASLLTSQ 694

  Fly   646 RMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVER 710
            :::..|.|...|          |:.|.|..:.|.|.|....:...|.:|:.....||.  |..|.
plant   695 KLNPTITSMSSL----------LEKGETVGYQRTSFILGKLKERGFPQSSLVPFDTAE--ECDEL 747

  Fly   711 VAKG--KG--SYAFLMESTSIEYVTERNCE-LTQVGGMLDTKSYGIATPPNSPYRTAINSVILKL 770
            ::||  ||  |.||| |...:.....:.|. ...|....:...:|...|..||....::..|||:
plant   748 LSKGPKKGGVSGAFL-EIPYLRLFLGQFCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKV 811

  Fly   771 QEEGKLHILKTKWWKEKRGGGKCRVETS----------KSSSAANELGLANVGGVFVVLMGGMGV 825
            .|..|...|:..|:|:|        |.|          ..|..:.:|.:.:    |:.|..|:.:
plant   812 AESPKAMELERAWFKKK--------EQSCPDPITNPDPNPSFTSRQLDIDS----FLFLFVGVLL 864

  Fly   826 ACVIAVCEFVW 836
            .||:|:..|.:
plant   865 VCVMALGNFTY 875

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	76/366 (21%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	95/385 (25%)
GLR2.3	NP_001325281.1	PBP1_GABAb_receptor_plant	69..436	CDD:380645	76/368 (21%)
		GluR_Plant	476..825	CDD:270404	94/383 (25%)
		Lig_chan	604..865	CDD:459656	71/299 (24%)