DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and grik5

DIOPT Version :9

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:830 Identity:345/830 - (41%)
Similarity:503/830 - (60%) Gaps:65/830 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QELAFRQAVDRINADRSILPRSKLVAQIERISPFDSFHAGKRVCGLLNIGVAAIFGPQSS-HTAS 106
            :.||...|.:.||:......|:::...|..:.....:.....:|.:|..||.::.||.|| .:.|
Zfish    53 ERLALALARENINSVMENPARARVEVDIFELQKDSQYETTDTMCQILPKGVVSVIGPASSPASGS 117

  Fly   107 HVQSICDNMEIPHLE------NRWDYRLRRESCLVNLYPHPNTLSKAYVDIVRHWGWKTFTIIYE 165
            .|..||...||||::      .|..| ||..|  |.|||....||.|...|:|.:.:.:.:::..
Zfish   118 IVSHICGEKEIPHVKIGPEETPRLPY-LRFAS--VTLYPSNEDLSLAIGSILRSFSYPSASLVCA 179

  Fly   166 NNDGIVRLQELLKAHGMTPFPITVRQLSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQ 230
            ..:.::||:||::...::...:::|.|.|:.|..||||:|::...|.|::|.:....:.:||:|.
Zfish   180 KAECLLRLEELIRRFLISRETLSIRMLDDNLDPTPLLKEIRDDKIATIIIDANASISYLILKKAS 244

  Fly   231 QIGMMSDYHSYLVTSLDLHTVNLDEFRYGGTNITGFRLINEKIVSDVVRQWSIDEKGLLRSANLT 295
            ::||.|.::.|::|::|...:.||:.....:||.||.:.|      ....:.::   .:||.||:
Zfish   245 ELGMTSAFYKYILTTMDFPLLWLDDIVDEQSNIVGFSMFN------TTHPFYLE---FIRSLNLS 300

  Fly   296 TVRS-----------ETALMYDAVHLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKI 349
            ....           .:||::||||:...|:.:|:.||:|.:.|:||.....||||.||:||:::
Zfish   301 WREGCDINPYPGPALSSALLFDAVHVVVSAVQELNRSQEIGVKPLSCTSPQIWQHGTSLMNYLRM 365

  Fly   350 VEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTW--------NSTLPDGINFTRTFSQKQ 406
            ||..|||..::|:.:|.||::.|.|:|....|.::||.|        |||..| ||.:.|     
Zfish   366 VEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIWYSNNTLLMNSTSLD-INVSET----- 424

  Fly   407 QEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDG 471
                  |.||:|::||||.|||.|||.:.....||:|:||:.||::.|:|..|.|.|:|:||.||
Zfish   425 ------LANKSLIITTILENPYVMRKINYQEFEGNEQYEGFCVDMLRELSDILKFTYRIKLVDDG 483

  Fly   472 SYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPN 536
            .||: .:..|.|.||:.||:.::||||:|..|||.|||:.:||:.|||.||:|||||..|.:.|.
Zfish   484 LYGA-PEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRVHIGRKPG 547

  Fly   537 LFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEW----PAYTDAHGEKVESQFTLLNCMWF 597
            .||||.|.|..||::|..|||.||.:||:.|:.:||||    |...:.. :.:|:|:||.|.:||
Zfish   548 YFSFLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPYEWYNPHPCLRERR-DLLENQYTLGNSLWF 611

  Fly   598 AIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTR 662
            .:|..||||.:.:|:|||||.|:|:||.||||:||||||||||||||:||:.||||.:|||.||.
Zfish   612 PVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTN 676

  Fly   663 IKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSYAFLMESTSI 727
            |:||.:.||||..||.:|:..||||||::|.|.:||||..|..||:.||...|  ||||:|||..
Zfish   677 IQYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVVNSK--YAFLLESTMN 739

  Fly   728 EYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGK 792
            ||....||.|||:||:||||.|||..|..||:|..::..:|:|||..:|.|||.:||:    |||
Zfish   740 EYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDELSLAVLQLQENNRLEILKRRWWE----GGK 800

  Fly   793 CRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRKVA 842
            |..|   ....|..||:.|:||:||||:.|:.:|..:||.||||.:|:.|
Zfish   801 CPKE---EDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFVWSTRRSA 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 115/379 (30%)
ANF_receptor 42..378 CDD:279440 107/352 (30%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 200/373 (54%)
Lig_chan 547..823 CDD:278489 147/279 (53%)
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 38..412 CDD:107389 111/370 (30%)
ANF_receptor 55..392 CDD:279440 106/348 (30%)
Periplasmic_Binding_Protein_Type_1 <313..383 CDD:299141 29/69 (42%)
Periplasmic_Binding_Protein_Type_2 427..797 CDD:304360 200/373 (54%)
Lig_chan 558..828 CDD:278489 147/279 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100167
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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