DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KaiR1D and Ir7d

DIOPT Version :9

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster


Alignment Length:546 Identity:114/546 - (20%)
Similarity:204/546 - (37%) Gaps:141/546 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 VEMKGLTNVIKFDHQGFR-------TDFM-----LDIVELTPA--GIRKIGTWNSTLPDGINFTR 400
            |...||..::....|..|       |.||     :::|.|.|.  |::..    :..|    :|.
  Fly   122 VNRNGLCVIVLLTSQPERPIMTKIFTYFMQERYNINVVILVPRLHGVQAF----NVRP----YTP 178

  Fly   401 TFSQKQQEIEANLKNKTL--VVTTILSN--------------PYC-MRKESAIPLSGNDQFEGYA 448
            |.....:.:|.::|:..|  |....|.|              ||. :..:|:.|:.|.|..:|. 
  Fly   179 TSCSSLEPVEIDIKDGDLWDVFPRRLKNLHGCPLSVIVWDIPPYMRINWKSSDPMDGLDGLDGL- 242

  Fly   449 VDLIHEISKSLGFNYK-IQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAV 512
              |:..:::.:.|..| |...|:|..|..:.:.|.:.|..:.|.|:||::.|.....|.||...:
  Fly   243 --LLRIVARKMNFTLKLIPNEPNGLIGGSSFMNGTFTGAYKMLRERRANITIGCAACTPERSTFL 305

  Fly   513 DFTTPFMNLGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAY 577
            :.|:|:..:.                          :|.:..|..|.|:...:|..|..|.|...
  Fly   306 EATSPYSQMS--------------------------YIIVLQARGGYSIYEVMLFPFEKYTWLLL 344

  Fly   578 TDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFL 642
            :           |:|...|. :||..:         :.:.::|| |..:..::.:||.|::..|:
  Fly   345 S-----------TILGLHWI-VGSRWR---------MPSPILAG-WMLWIFVIRASYEASVFNFI 387

  Fly   643 TVERMDSPIESAEDLAKQTRIKYGALKGG-----STAAFFRDSKISTYQRMWSFMESARP-SVFT 701
                .:||::.:.....|      ||.||     ..|::....||.::|.. :.:.:.:| .||.
  Fly   388 ----QNSPVKPSPRTLDQ------ALSGGFRFITDHASYRMTLKIPSFQGK-TLISAGQPVDVFD 441

  Fly   702 A------SNGEGVERVAKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYR 760
            |      ..|....|        |||.:.. :.:...|| :|..:...:......:..|..|.:.
  Fly   442 ALLKAPWKTGAFTSR--------AFLADHL-VRHRKHRN-QLVILAEKIVDNMLCMYFPHGSYFA 496

  Fly   761 TAINSVILKLQEEG--KLHILKTKW-----WKEKRGGGKCRVETSKSSSAANELGLANVGGVFVV 818
            ..||.::..::..|  :.|.....|     ..:....|| |:.:|..|.|.   |.|. ...|||
  Fly   497 WEINKLLFNMRSFGIFQHHSQILAWDNLPTTTDTDTPGK-RIHSSTESVAT---GFAE-SMSFVV 556

  Fly   819 -----LMGGMGVACVIAVCEFVWKSR 839
                 |||.:.::.|:...|.:.:.|
  Fly   557 AALNCLMGALCISIVVFGLELLSRRR 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 13/60 (22%)
ANF_receptor 42..378 CDD:279440 9/39 (23%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 80/406 (20%)
Lig_chan 547..823 CDD:278489 64/299 (21%)
Ir7dNP_001138175.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.