Protein Alignment KaiR1D and grid1b

DIOPT Version :10

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: XP_009304811.1
• Gene: grid1b / 557511
• ZFINID: ZDB-GENE-121214-84
• Length: 1048
• Species: Danio rerio
• Alignment Length: 915
• Identity: 275/915 - (30%)
• Similarity: 439/915 - (47%)
• Gaps: 126/915 - (13%)

  Fly     9 LPLLLLQL---ILNCRKAQSLPDIIKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQI 70
            :.||::.|   ||.|..| ....||.||.:|.......:..|:.|:..::.:..||...|:...|
Zfish     1 MELLIICLSFGILQCSSA-GADSIIHIGAIFEENAARDDEVFQLAISDLSLNDDILQSEKITHSI 64

  Fly    71 ERISPFDSFHAGKRVCGLLNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWDYRLR------ 129
            :.|.|.:.|.|.:..|.|:..|:.|:.......:||.:||:.|.|.||||     |..|
Zfish    65 KYIEPNNPFQAVQEACELMTQGILALVTSTGCASASALQSLTDAMHIPHL-----YVQRNAEGSP 124

  Fly   130 RESCLVNLYPH----------PNTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTP 184
            |.:|.:|..|.          |..|....:.:|....|:.|.:.|:::..|..||..|.......
Zfish   125 RTACQLNPSPDGERYTLAARPPVRLGDVMLTLVGELRWQKFIVFYDSDYDIRGLQVFLDQTSRQG 189

  Fly   185 FPITVRQL--SDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQI----GMMSDYHSYLV 243
            ..::::::  :.||.:..|...::..         ...|..:.|::|..:    |.....|..:.
Zfish   190 LDVSLQRVDRNISGVFSSLFTSMRTE---------ELNRYRDTLRRAILLLSPRGAQVFIHQAVE 245

  Fly   244 TSL---DLHTVNLDEFRYGGTNITGFRLINEKIVSD---------------VVRQ----WSIDEK 286
            |:|   |.|.|                .:||:| ||               ||||    |.....
Zfish   246 TNLASKDSHWV----------------FVNEEI-SDTEILELAHSSLGRMTVVRQIFPLWRDSSV 293

  Fly   287 GLLRSAN-------------LTTVRSETALMYDAVHLFAKALH-DLDTSQQIDIHPISCDGQST- 336
            ..:|:::             |.::......:||:|.:.|.|.: .|:..:...:..::|..:||
Zfish   294 SCMRNSHRISSLLCDPQEGYLQSLEVSNLYLYDSVLMLANAFYRKLEDRKWHSMASLNCIRKSTK 358

  Fly   337 -WQHGFSLINYMKIVEMKGLTNVIKFDHQGFRTDFMLDIV-----ELTPAGIRKIGTWNSTLPDG 395
             |..|:|::..::...:.|||.::.|...|..:....:|:     |.....|:::.||:|.  .|
Zfish   359 PWNGGWSMLETIQKGRITGLTGIMDFMENGSNSHVQFEILGTSFSETFGKDIKRLATWDSV--HG 421

  Fly   396 INFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLG 460
            :|    .|.|:..||..::..|:.|.|:|.:|:.|..|:.  |....:::|:::|::..::|.||
Zfish   422 LN----GSLKESRIENGMQGVTVKVVTLLEDPFVMVAENI--LGQPKRYKGFSIDVLEALAKILG 480

  Fly   461 FNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSI 525
            |.|.|..|.|..||| ....|.|||||.||:.:|||||::.:|||.|||..|||:..:|:..|.|
Zfish   481 FKYDIYQVADSKYGS-QLSNGSWNGMIGELINKRADLAVSAITITPERENVVDFSKRYMDYSVGI 544

  Fly   526 LYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFT 590
            |:||| ::..|:||..:|..|.||..:|.|...|.||:|:|.:...........||.....|. :
Zfish   545 LHRKP-EEKINIFSLFAPFDLAVWACIAAAIPVVGVLIFLLTRMQMLRSQNPPGAHHASSMSN-S 607

  Fly   591 LLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAE 655
            |.:.:|...|:.:|||.|.:..:::.|:|.|.||.||||:.|||||||||||||.|||:.|.:.:
Zfish   608 LHSAIWIVYGAFVQQGGDSVVGSVALRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQ 672

  Fly   656 DLAKQTRIKYGALKGGSTAAFFRD------SKISTYQRMWSFMESARPSVFTASN-GEGVERVAK 713
            |||:|....||.::..:...:|:.      .:.|||..:|..:.......|:.|: .||: |.||
Zfish   673 DLARQMDFAYGTVRDSAVYDYFKAKGTNPLEQDSTYAELWRTISKNNGQDFSVSSPSEGI-RKAK 736

  Fly   714 GKGSYAFLMESTSIEY--VTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKL 776
             ||.||||.:...:||  :|:.:|.:|..|..:.:|.||||....||||..|:..||:|||:|.|
Zfish   737 -KGPYAFLWDMAVVEYAALTDDDCTITVSGNSMSSKGYGIAMQHGSPYRDLISQKILELQEKGDL 800

  Fly   777 HILKTKWWKEKRGGGKCRVET-SKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRK 840
            .:||.|||...   |:|.:.: |.:......|.|.:..|||.:|..|:.:||::|..|..|.|.:
Zfish   801 DVLKQKWWPRT---GRCDLNSHSNAQPDGRSLKLHSFAGVFCILAAGLLLACLVAALEMWWNSNR 862

  Fly   841 VAVEE 845
            ...|:
Zfish   863 CRQEQ 867

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	93/433 (21%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	151/378 (40%)
grid1b	XP_009304811.1	PBP1_iGluR_delta_1	25..426	CDD:380615	93/437 (21%)
		Periplasmic_Binding_Protein_Type_2	437..809	CDD:473866	151/378 (40%)