DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and NPR3

DIOPT Version :10

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_001191304.1 Gene:NPR3 / 4883 HGNCID:7945 Length:541 Species:Homo sapiens


Alignment Length:411 Identity:77/411 - (18%)
Similarity:149/411 - (36%) Gaps:102/411 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PADDHQ-----------ELAFRQAVDRINADRSILP---RSKLVAQIERISPFDSFHAGKRVCGL 88
            |.||..           |.|.| :|:.....|.:||   |.::.        ::....|.|....
Human    60 PQDDSYLFSLTRVRPAIEYALR-SVEGNGTGRRLLPPGTRFQVA--------YEDSDCGNRALFS 115

  Fly    89 LNIGVAA--------IFGPQSSHTASHVQSICDNMEIPHLE-----NRWDYRLRRESCLVNLYPH 140
            |...|||        |.||...:.|:.|..:..:.::|.|.     ..:.::....|.|..:.|.
Human   116 LVDRVAAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA 180

  Fly   141 PNTLSKAYVDIVRHWGWKTFTIIYENNDGIVR--------LQELLKAHGMTPFPITVRQLSDSGD 197
            ...:.:..:.:.||..|....::| ::|.:.|        :.|:.:..|:.....:..:..|. |
Human   181 YAKMGEMMLALFRHHHWSRAALVY-SDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDL-D 243

  Fly   198 YRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSL--------------DL 248
            ...:::.|: ::|..:::..|::.|..::..|.:.||.|..:::....|              |.
Human   244 LEDIVRNIQ-ASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDGSWKRGDK 307

  Fly   249 HTVNLDEFRYGGTNITGFRLIN---EKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHL 310
            |.....:.......:|..|.:.   ||...:|  :.|::::||              .|.|.|::
Human   308 HDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEV--KSSVEKQGL--------------NMEDYVNM 356

  Fly   311 FAKALHDLDTSQQIDIHPI------SCDG----QSTWQHGFSLINYMKIVEMKGLTNVIKFDHQG 365
            |.:..||......:.:|.:      ..||    |.||...|           :|:...:..|..|
Human   357 FVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTF-----------EGIAGQVSIDANG 410

  Fly   366 FR-TDFMLDIVELTPAGIRKI 385
            .| .||.:..:....||.:::
Human   411 DRYGDFSVIAMTDVEAGTQEV 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..400 CDD:380605 77/411 (19%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:473866
NPR3NP_001191304.1 PBP1_NPR_C 51..446 CDD:380609 77/411 (19%)
TM_EphA1 476..507 CDD:214014
Blue background indicates that the domain is not in the aligned region.

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