DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and LOC4576285

DIOPT Version :10

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_061502502.1 Gene:LOC4576285 / 4576285 VectorBaseID:AGAMI1_009844 Length:456 Species:Anopheles gambiae


Alignment Length:500 Identity:118/500 - (23%)
Similarity:212/500 - (42%) Gaps:149/500 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTP----FPI-TVRQL---SDSGDYRPLL 202
            :|.:|.||::||.....:|:::||::|||::.:  |:.|    |.: ||:::   ||:.::...:
Mosquito    53 QAIIDTVRYYGWDRIIYMYDSHDGLLRLQQIYQ--GLRPGNETFHVETVKRIANVSDAIEFLRTI 115

  Fly   203 KQIKNSAEAHIVLDCSTERIHE-VLKQAQQIGMMSDYHSYLVTSLDLHTVNLDE------FRYGG 260
            :::...:..|||||||||...: |:...:.|.:....:.||::.|     .:|:      ..||.
Mosquito   116 EELNRWSRKHIVLDCSTELAKDIVVSHVRDITLGKRTYHYLLSGL-----VMDDRWESEVIEYGA 175

  Fly   261 TNITGFRLI--NEKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHLFAKALHDL----- 318
            .||||||::  ::|.|.:.:..|...:....:.|....:.::.|||||||.:..:|...:     
Mosquito   176 INITGFRIVDTSKKYVKEFLDGWKRLDPTTSQGAGKELISAQAALMYDAVFVLVEAFSKIMRKKP 240

  Fly   319 ---------DTSQQIDI-----HPISCDGQ----STWQHGFSLINYMKIVEMKGLTNVIKFDHQG 365
                     :..|..::     ..:.|:..    :.|:||..:..|::.||:.|||..|:|:..|
Mosquito   241 DQFRAYTMRNRGQPFNLPANGTRTLDCNTSKGWVTPWEHGDKISRYLRKVEISGLTGDIRFNEDG 305

  Fly   366 FRTDFMLDIVELT-PAGIRKIGTWN---STLPDGINFTRTFSQKQQEIEANLKNKTLVVTTILSN 426
            .|.::.|.:||:| .:.:.|:..|:   ...|....:||..:....|     :|||.:||||:..
Mosquito   306 KRQNYTLHVVEMTVNSAMVKVAEWSDEGGLAPVVAKYTRLKTDMHYE-----RNKTYIVTTIIEE 365

  Fly   427 PYCM--RKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRE 489
            ||.|  :.|....|..|::||||..||...::|.||.|     .|..|                 
Mosquito   366 PYIMLRQPEPGETLETNERFEGYCKDLAELVAKKLGIN-----CPRAS----------------- 408

  Fly   490 LLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMAT 554
                           ...|.|::|                                         
Mosquito   409 ---------------QLRRCQSID----------------------------------------- 417

  Fly   555 AYLGVSVLLFILAKFTPYEWPA--YTDAHGEKV----ESQFTLLN 593
                   :|:|:::|:|:||..  |.|...:.|    .::|:.|:
Mosquito   418 -------VLYIVSRFSPFEWRLVNYNDEQPDAVPQATANEFSALS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..400 CDD:380605 76/297 (26%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:473866 39/186 (21%)
LOC4576285XP_061502502.1 None

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