Protein Alignment KaiR1D and Ir76b

DIOPT Version :10

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: NP_649176.1
• Gene: Ir76b / 40198
• FlyBaseID: FBgn0036937
• Length: 636
• Species: Drosophila melanogaster
• Alignment Length: 539
• Identity: 113/539 - (20%)
• Similarity: 214/539 - (39%)
• Gaps: 110/539 - (20%)

  Fly   356 TNVIKFDHQGFR---TDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIE------- 410
            ||:|:....|..   |:..:| |:.:.||      :::..|  :....|.::|:.::.
  Fly    26 TNLIQMGENGTLSPVTELPMD-VDASEAG------FDADAP--VETLETINRKKPKLREMLDWIG 81

  Fly   411 ------ANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVP 469
                  |.|::..|..|.:|.|             |.....|.:..:|..:.|...|.|::.:..
  Fly    82 GKHLRIATLEDFPLSYTEVLEN-------------GTRVGHGVSFQIIDFLKKKFNFTYEVVVPQ 133

  Fly   470 DGSYGSLNKLTGEWNGMIRELLE----QRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKP 530
            |...||.:...       |.|:|    ...|||.|.:....::...|.::|..::.|..|:..:.
  Fly   134 DNIIGSPSDFD-------RSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQR 191

  Fly   531 IKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILA----KFTPYEWPAYTDAHGEKVESQFTL 591
            .::..:....|:|....|||.:..:.|.|..:::.|.    :.|           |:..::.::|
  Fly   192 PRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIILRNRLT-----------GDGQQTPYSL 245

  Fly   592 LNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED 656
            .:|.||..|:||:||....|.|.|||::...||.|..|:.|.|||||.||||:.:...|..:..|
  Fly   246 GHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVND 310

  Fly   657 LAKQTRIKYGALKGGSTAAFFR--DSKISTYQRM----WSFMESARPSVFTASNGEGVERVAKGK 715
            :..:.: .:.:::||......|  :..:|...||    ::.........:...|  .||     |
  Fly   311 ILTKNK-HFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQN--YVE-----K 367

  Fly   716 GSYAFLMESTSIEYVTERNCELTQVGGMLDTK---SYGIATPP----NSPYRTAINSVILKLQEE 773
            ..|.|:.:..:|..:..|:....:.....|.|   .:.:|..|    ...:...|.|.:.:|.:.
  Fly   368 NGYVFVRDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDP 432

  Fly   774 GKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGG------------VFVVLMGGMGVA 826
            ..||::::...|          ..||.:..:.|:...::||            .:.:::.|...|
  Fly   433 ELLHLVESGIVK----------HLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYYIMLAGFATA 487

  Fly   827 CVIAVCEFVWK---SRKVA 842
            ..:...|.:::   ||:.|
  Fly   488 LAVFSTELMFRYVNSRQEA 506

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	10/46 (22%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	87/390 (22%)
Ir76b	NP_649176.1	Lig_chan-Glu_bd	83..192	CDD:463166	26/128 (20%)
		Lig_chan	209..458	CDD:459656	65/277 (23%)