DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and Ir7g

DIOPT Version :9

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster


Alignment Length:605 Identity:120/605 - (19%)
Similarity:224/605 - (37%) Gaps:150/605 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 RSANLTTVRSETALMYDAVHLFAKALHDLDTS-------QQID-IHPISCDG--QSTWQHGFSLI 344
            |:.||..|.|..||:...:|.:..   ..|||       ||.| :.|....|  ...|:|  .||
  Fly    95 RTHNLLLVDSLDALLDIEIHTYTA---QSDTSEYYFIFLQQRDALIPHDMQGVFAYCWRH--QLI 154

  Fly   345 NYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEI 409
            |...:.:..|...::   |..|         ...|      |..|.:.|..||.....|.|.::.
  Fly   155 NCNVMTQSSGGQVLL---HTYF---------PYAP------GQCNDSQPTRINMFLGESWKHRDY 201

  Fly   410 EA----NLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPD 470
            ..    ||....|:|.....:|:....|      |..:..|....|:.|:|:.:  |:.||.  .
  Fly   202 FPSKLHNLNGCPLIVLARKVSPFLDLDE------GQRELRGLEGRLLQELSRRM--NFSIQF--S 256

  Fly   471 GSYGSL-NKLTGEWNGMIRELLEQRADLAIADLTITFEREQ---AVDFTTPFMN-----LGVSIL 526
            |....| |:.|.....::::|:::|    ||.|.|.:.|::   |.:.|..|.:     :|..:|
  Fly   257 GLQDQLKNRTTWTEKQLLQKLVQER----IAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLL 317

  Fly   527 YRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTL 591
            ....:.. ..::||  |.....||.:..::|.:|.|..:               | .....:..|
  Fly   318 NAHNLTS-LEIWSF--PFQALTWICLVFSFLSISCLALL---------------HXRGAGDRLAL 364

  Fly   592 LNCMWFA-IGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAE 655
            :..::.| :|..:..     |:..|.:::...|..|.||:.|.|:|.|...|..........:.:
  Fly   365 VLAVYAASLGLPIDP-----PERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQ 424

  Fly   656 DLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVER------VAKG 714
            ||   |...|.|:.|.:|....|:  :.:.|.:...    :..:.|:...|.|.|      :.:|
  Fly   425 DL---THGDYAAVMGRTTLQDLRE--VPSLQDLLGL----KSVIVTSEREEEVLRTLDRCTLREG 480

  Fly   715 KGSYAF---LMESTSIEYVTERNCELTQVGG-------MLDTKSYGIATPPNSPYRTAINSVILK 769
            .||:..   |:...::.::|:|.   .:.|.       :|: :...|....:|...:.::.:::.
  Fly   481 AGSHPLFFGLISQDALLHLTQRG---HRAGAYHIIPQDVLE-QQLAIYLQKHSHLASHLDHLVMS 541

  Fly   770 LQEEGKLHILKTKW---------------WKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVL 819
            ::..|.:|    .|               ::|||                  :...::..|:::.
  Fly   542 IRSVGLVH----HWAGQMASERYFRSRFLYREKR------------------IRQPDLWAVYILT 584

  Fly   820 MGGMGVACVIAVCEFVWKSR 839
            .|...::.|:.:||.:...|
  Fly   585 AGLYLLSLVVFICELLASRR 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 28/116 (24%)
ANF_receptor 42..378 CDD:279440 24/97 (25%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 77/410 (19%)
Lig_chan 547..823 CDD:278489 51/307 (17%)
Ir7gNP_001368933.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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