DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and Ir7a

DIOPT Version :9

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster


Alignment Length:656 Identity:113/656 - (17%)
Similarity:209/656 - (31%) Gaps:226/656 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 FHAGKRVCGLLNIGVAAIFGPQSSH-----------TASHVQSICDNMEIPHLENRWDYRLRRES 132
            ||....:.||.::.:.|:..||...           .|..|......:.:..|....::|..|:.
  Fly     2 FHHLWLLMGLRSLAMGALHPPQPEAMTPLVAAALEILAEQVSPSQSTLAVMDLTQDAEHRDERQE 66

  Fly   133 CLVNLYPHPNTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQLSDSGD 197
            .|:                         |||..:....:.|:...|.....|....|..::.:..
  Fly    67 QLM-------------------------TIILRSVGSEMALRTFQKPPAEVPASFVVFLVNSAQA 106

  Fly   198 YRPL---LKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVN---LDEF 256
            :..|   ...|.::.|.:.::..:    |.:..:|:::.::.|...   |.:..||.|   |.|.
  Fly   107 FNTLGFHFTDIHSTREFNFLILLT----HRMSSRAERLQVLRDISR---TCVRFHTSNVILLTEK 164

  Fly   257 RYGGTNITGFRLIN-EKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHLFAKALHDLDT 320
            |.|...:..:||:| :..:|..:....|.:.||.|..:  ..||           |.:.|.....
  Fly   165 RDGVVLVYAYRLLNMDCDLSVNLELIDIYKNGLFRHGH--EARS-----------FNRVLSLSGC 216

  Fly   321 SQQIDIHP----ISCDGQST--------WQ-HGF---------SLINYMKIVE---MKGLTNVIK 360
            ..|:..:|    :|..|.|:        |: .|.         |:.::..::|   .|.|:..||
  Fly   217 PLQVSWYPLPPFVSFIGNSSDPEERAQIWRLTGIDGELIKLLASIFDFRILLEEPCNKCLSPDIK 281

  Fly   361 FDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEI---------------- 409
            .|..|     ..|.|.::.:.| .||..:.:.....:|:.|.|..|..:                
  Fly   282 DDCSG-----CFDQVIISNSSI-LIGAMSGSHQHRSHFSFTSSYHQSSLVFIMHMSSQFGAVAQL 340

  Fly   410 --------------------------------EANLKNKTL-VVTTILSNPYCMRKESAIPLSGN 441
                                            .::|.:..| |:||::.||...|   ::|.|..
  Fly   341 AVPFTVIVWLALVVSSLLLVLVLWMRNRLVCGRSDLASHALQVLTTLMGNPLEAR---SLPRSSR 402

  Fly   442 ------------------------DQFE-GYAVDLIHEISKSLGFNYKI--------------QL 467
                                    |.|. .|...|..|||:.:..||.:              .|
  Fly   403 LRILYAGWLLLVLVLRVVYQGKLFDSFRLPYHKPLPTEISELIRSNYTLINQEYLDYYPRELTVL 467

  Fly   468 VPDGSYGSLNKLTG----------------EWNGMIR----ELLEQRADLAIADLTITFEREQAV 512
            ..:||....:.:.|                |:..|:.    .|...:..:.:..:.|...|...:
  Fly   468 TRNGSKDRFDYIQGLGKEGKFTTTSLIATMEYYNMMHWSTSRLTHIKEHIFLYQMVIYLRRHSLL 532

  Fly   513 DFT-----TPFMNLGV---------SILYRKPIKQPPNLFSFLSPLSLDVW---IYMATAYLGVS 560
            .|.     ...::.|:         :..||||.::...    ::|:.||.:   .|::..:|..:
  Fly   533 KFAFDRKIKQLLSAGIIGYFVREFDACQYRKPFEEDYE----VTPIPLDSFCGLYYISLIWLSAA 593

  Fly   561 VLLFIL 566
            |:.|||
  Fly   594 VVAFIL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 66/360 (18%)
ANF_receptor 42..378 CDD:279440 63/341 (18%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 42/229 (18%)
Lig_chan 547..823 CDD:278489 7/23 (30%)
Ir7aNP_572406.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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