DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and GRIK5

DIOPT Version :9

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:868 Identity:353/868 - (40%)
Similarity:526/868 - (60%) Gaps:58/868 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLQLIL-----NCRKAQSLPDIIKIGGLFHPADDH------QELAFRQAVDRINADRSILPRSK 65
            |||.||:     :|:...||    ::..:.   ||.      :.||...|.::||....:..:::
Human     5 LLLLLIVAFASPSCQVLSSL----RMAAIL---DDQTVCGRGERLALALAREQINGIIEVPAKAR 62

  Fly    66 LVAQIERISPFDSFHAGKRVCGLLNIGVAAIFGPQSS-HTASHVQSICDNMEIPHLE------NR 123
            :...|..:.....:.....:|.:|..||.::.||.|| .:||.|..||...||||::      .|
Human    63 VEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPR 127

  Fly   124 WDYRLRRESCLVNLYPHPNTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPIT 188
            ..| ||..|  |:|||....:|.|...|::.:.:.:.::|....:.::||:||::...::...::
Human   128 LQY-LRFAS--VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLS 189

  Fly   189 VRQLSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNL 253
            ||.|.||.|..||||:|::...:.|::|.:....|.:|::|.::||.|.::.|::|::|...::|
Human   190 VRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHL 254

  Fly   254 DEFRYGGTNITGFRLIN--EKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHLFAKALH 316
            |......:||.||.:.|  .....:.||..::..:....::.........|||:||||:...|:.
Human   255 DGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEASTYLGPALSAALMFDAVHVVVSAVR 319

  Fly   317 DLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAG 381
            :|:.||:|.:.|::|...:.|.||.||:||:::||..|||..::|:.:|.||::.|.|:|.:..|
Human   320 ELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQG 384

  Fly   382 IRKIGTWNSTLPDGINFTRTFSQKQQEIEANLK----NKTLVVTTILSNPYCMRKESAIPLSGND 442
            .|:||.|.|        .||.:.....::.||.    ||||||||||.|||.||:.:...||||:
Human   385 HREIGVWYS--------NRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNE 441

  Fly   443 QFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELL-EQRADLAIADLTITF 506
            :|||:.||::.|:::.|.|.|:::||.||.||: .:..|.|.||:.||: .|:||||:|..|||.
Human   442 RFEGFCVDMLRELAELLRFRYRLRLVEDGLYGA-PEPNGSWTGMVGELINRQKADLAVAAFTITA 505

  Fly   507 EREQAVDFTTPFMNLGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTP 571
            |||:.:||:.|||.||:|||||..:.:.|..||||.|.|..||::|..|||.||.:||:.|:.:|
Human   506 EREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSP 570

  Fly   572 YEW----PAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMIS 632
            |||    |... |....:|:|:||.|.:||.:|..||||.:.:|:|||||.|:|:||.||||:||
Human   571 YEWYNPHPCLR-ARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIIS 634

  Fly   633 SYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARP 697
            ||||||||||||:||:.|:|||:|||.||.|:||.:..|||..||::|:..||||||::|:|.:|
Human   635 SYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQP 699

  Fly   698 SVFTASNGEGVERVAKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTA 762
            |||..|..||:.||...:  ||||:|||..||....||.|||:||:||||.|||..|..||:|..
Human   700 SVFVKSTEEGIARVLNSR--YAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDE 762

  Fly   763 INSVILKLQEEGKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVLMGGMGVAC 827
            |...||:|||..:|.|||.|||:    ||:|..|   ....|..||:.|:||:|:||:.|:.:|.
Human   763 ITLAILQLQENNRLEILKRKWWE----GGRCPKE---EDHRAKGLGMENIGGIFIVLICGLIIAV 820

  Fly   828 VIAVCEFVWKSRKVAVEERLSAI 850
            .:||.||:|.:|:.|..|...|:
Human   821 FVAVMEFIWSTRRSAESEETPAL 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 112/380 (29%)
ANF_receptor 42..378 CDD:279440 104/350 (30%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 204/374 (55%)
Lig_chan 547..823 CDD:278489 147/279 (53%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 114/387 (29%)
ANF_receptor 42..379 CDD:279440 103/339 (30%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 204/374 (55%)
Lig_chan 546..816 CDD:278489 147/279 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100167
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7871
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.860

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