DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and GRIK3

DIOPT Version :9

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:852 Identity:402/852 - (47%)
Similarity:578/852 - (67%) Gaps:49/852 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AQSLPDIIKIGGLFHPAD-------DHQELAFRQAVDRINADRSILPRSKLVAQIERISPFDSFH 80
            ::.:|.:|:|||:|..||       :.:|.|||.:.:.||.:|::||.:.|...|:||...|||.
Human    29 SRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFE 93

  Fly    81 AGKRVCGLLNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWDYRL--RRESCLVNLYPHPNT 143
            |.|:.|..|.:||.|||||......:.|||||:.:|:||::.||.:..  .:::..|||||...:
Human    94 ATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYAS 158

  Fly   144 LSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQLS-DSGDYRPLLKQIKN 207
            ||.|.:|:|::..|::.|::|:::.|::|||||:.|.......:.:|||. ||.|.|||||::|.
Human   159 LSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR 223

  Fly   208 SAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEFRYGGTNITGFRLIN-- 270
            ..|..|:.|||.....::||||..:|||::|:.::.|:|||:.::|:.:||.|.|:||||::|  
Human   224 GREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVD 288

  Fly   271 EKIVSDVVRQWSID--------EKGLLRSANLTTVRSETALMYDAVHLFAKALHDLDTSQQIDIH 327
            ...||.:|.:||::        |.|||....:|    :.||:|||||:.:..   ...:.|:.::
Human   289 NPHVSAIVEKWSMERLQAAPRSESGLLDGVMMT----DAALLYDAVHIVSVC---YQRAPQMTVN 346

  Fly   328 PISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDH-QGFRTDFMLDIVELTPAGIRKIGTWNST 391
            .:.|.....|:.|...:|::|..:.:|||..|.|:. .|.||||.|||:.|...|:.|:|.|:..
Human   347 SLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPA 411

  Fly   392 LPDGINFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEIS 456
              ||:|.|.....:...:..:|.|::|:|||:|..|:.|.::|...|.|||:||||.:||:.|::
Human   412 --DGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELA 474

  Fly   457 KSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNL 521
            ..|||:|:|:||.||.||:.:. .|:||||::||::.:||||:|.||||..||:|:||:.|||.|
Human   475 HILGFSYEIRLVEDGKYGAQDD-KGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTL 538

  Fly   522 GVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAH----- 581
            |||||||||....|::||||:|||.|:|:|:..||||||.:||::|:|:||||   .|||     
Human   539 GVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEW---YDAHPCNPG 600

  Fly   582 GEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVER 646
            .|.||:.|||||..||.:|||||||.:.:|||||||::.|||||||||:||||||||||||||||
Human   601 SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVER 665

  Fly   647 MDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERV 711
            |:|||:||:||||||:|:|||:|.|:|..||:.|||||:::||:|| |::||....:|.||::|.
Human   666 MESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFM-SSKPSALVKNNEEGIQRA 729

  Fly   712 AKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKL 776
            .  ...||.|||||:|||||:|||.|||:||::|:|.|||.||..||||..|...||:||||.||
Human   730 L--TADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792

  Fly   777 HILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRKV 841
            ||:|.|||   ||.| |..|.:|.:||   ||:..:||:|:||..|:.::.::||.|||:|.||.
Human   793 HIMKEKWW---RGSG-CPEEENKEASA---LGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKT 850

  Fly   842 AVEERLS 848
            |..|:.|
Human   851 AEREQRS 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 145/386 (38%)
ANF_receptor 42..378 CDD:279440 132/349 (38%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 224/374 (60%)
Lig_chan 547..823 CDD:278489 167/280 (60%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 147/391 (38%)
ANF_receptor 55..398 CDD:279440 132/349 (38%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 225/377 (60%)
Lig_chan 564..832 CDD:278489 167/280 (60%)
Glutamate binding. /evidence=ECO:0000250 690..692 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 262 1.000 Domainoid score I1948
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 803 1.000 Inparanoid score I501
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - otm40750
orthoMCL 1 0.900 - - OOG6_100167
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7871
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.810

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