Sequence 1: | NP_650925.1 | Gene: | KaiR1D / 42473 | FlyBaseID: | FBgn0038837 | Length: | 853 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263284.1 | Gene: | Grin3a / 242443 | MGIID: | 1933206 | Length: | 1135 | Species: | Mus musculus |
Alignment Length: | 898 | Identity: | 204/898 - (22%) |
---|---|---|---|
Similarity: | 359/898 - (39%) | Gaps: | 186/898 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 AVDRINADRSILPRS---KLVAQIER------ISPF---------DSFHAGKRVCGLLNI-GVAA 95
Fly 96 IFG-PQSSHTASHVQSICDNMEIPHL-----------ENRWDYRLRRESCL-------VNLYPHP 141
Fly 142 NTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQLSDSGD----YRPLL 202
Fly 203 KQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTV-----NLDEFRYGGTN 262
Fly 263 ITGFRLINEKIVSDVVRQWSIDEKGLLRS--ANLTTVRSETALMYDAVHLFAKALHDLDTSQQID 325
Fly 326 IHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQ---GFRTDFMLDIVELTPAG---IRK 384
Fly 385 IGTWNS---TLPDGINFTRTFSQKQQEIEANL--KNKT-LVVTTILSNPYCMRKE---------- 433
Fly 434 -------------------------SAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSY 473
Fly 474 GSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLF 538
Fly 539 SFLSPLSLDVWIYMATAYLGVSVLLFILAKF-TPYEW--PAYTDAHG---EKVESQFTLLN-CMW 596
Fly 597 FAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAED--LAK 659
Fly 660 QTR-IKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSY-AFLM 722
Fly 723 ESTSIEYVT--ERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWK 785
Fly 786 EKRGGGKCRVETSKSSSAANE---LGLANVGGVFVVLMGGMGVACVIAVCEFV 835 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
KaiR1D | NP_650925.1 | PBP1_iGluR_Kainate | 31..397 | CDD:107377 | 80/404 (20%) |
ANF_receptor | 42..378 | CDD:279440 | 75/379 (20%) | ||
Periplasmic_Binding_Protein_Type_2 | 415..785 | CDD:304360 | 108/418 (26%) | ||
Lig_chan | 547..823 | CDD:278489 | 79/291 (27%) | ||
Grin3a | NP_001263284.1 | PBP1_iGluR_NMDA_NR3 | 30..497 | CDD:107372 | 81/410 (20%) |
PBP2_iGluR_NMDA_Nr3 | 512..908 | CDD:270438 | 106/416 (25%) | ||
Lig_chan | 676..942 | CDD:278489 | 79/291 (27%) | ||
PPP2CB binding site. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 951..987 | 1/4 (25%) | |||
GIT1-binding. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 1082..1115 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |