Protein Alignment KaiR1D and glr-8

DIOPT Version :9

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: NP_001368711.1
• Gene: glr-8 / 180924
• WormBaseID: WBGene00001619
• Length: 547
• Species: Caenorhabditis elegans
• Alignment Length: 496
• Identity: 108/496 - (21%)
• Similarity: 189/496 - (38%)
• Gaps: 60/496 - (12%)

  Fly   376 ELTPAGIRKIGTWNSTL---------PDGINFTR------TFSQKQQEIEANLKNKTL-VVTTIL 424
            |.|.|....|.|.|:.|         |...:.|.      |.|.::....:.:|.:|| :|...:
 Worm     7 ENTTADPNSIRTLNNILESINEKVAHPPQTSLTSDYGDAYTLSNEKHFSLSEMKGRTLKMVVPAI 71

  Fly   425 SNPYCMR---KESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGM 486
            ..||...   .::|:...|..  .|..::::.||.|.|...|:|......::|..  |.|.|.|.
 Worm    72 EPPYVNYVNFSDAAVTDKGYG--PGVVMEILKEIGKRLNLTYEILPALGSTWGEY--LNGSWTGA 132

  Fly   487 IRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIK-QPPNLFSFLSPLSLDVWI 550
            ..:|:....||......:.::|....|.|.||......|:.|.|.| :...|.....|.|.:||:
 Worm   133 FGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWV 197

  Fly   551 YMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTL--LNCMWFAIGSLMQQGCDFLPKA 613
            ..|...|...|:..::....            .||..:.|:  ...:|......:|||....|::
 Worm   198 ITAAVILISGVIFLVMTNII------------RKVYEEMTVTPFESIWVFFSIFVQQGLPEQPRS 250

  Fly   614 LSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALK------GGS 672
            .|.|::..:||..::.:.:::|.:|.|...|::.:.|.::.:.|.:  .:|.|..:      ..:
 Worm   251 WSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPFQNIDQLVR--LVKQGKFEIVMDENSFT 313

  Fly   673 TAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSYAFLMESTSIEYVTERNCEL 737
            .......||:..|:.:|..|.......:......||..|....| ||.|....::.:....:|::
 Worm   314 RTEMIARSKLPVYRDLWHEMIVNHKVKYVNGIARGVAFVRANPG-YALLGPMATLNFYAYSDCKV 377

  Fly   738 TQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGG------GKCRVE 796
            ......:......|....||.|....::.|.::.|.|    ...||..:.|..      .:|
 Worm   378 ILFNDGILPVYLSIPLVKNSIYSPYFSTKIREMVERG----FTQKWIADYRSYVAMQKINEC--- 435

  Fly   797 TSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWK 837
            .|.:....:.|.|....|.|.|.:||.|:...:.|.||::|
 Worm   436 NSTTIGPKSYLDLKRAQGAFWVFLGGAGLGLALFVGEFIFK 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..397	CDD:107377	8/29 (28%)
		ANF_receptor	42..378	CDD:279440	1/1 (100%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:304360	81/382 (21%)
		Lig_chan	547..823	CDD:278489	56/289 (19%)
glr-8	NP_001368711.1	PBP2_iGluR_ligand_binding	62..424	CDD:270219	81/384 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1052
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000021
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.770