DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and LOC1273165

DIOPT Version :10

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_061503118.1 Gene:LOC1273165 / 1273165 VectorBaseID:AGAMI1_009742 Length:1024 Species:Anopheles gambiae


Alignment Length:821 Identity:421/821 - (51%)
Similarity:570/821 - (69%) Gaps:24/821 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQIERISPFDSFHAGKRVCGLLNIGVA 94
            |||||||....|..||||:.||:.:|.::......:|.||..::...|.|...|::|.||..|||
Mosquito    51 IKIGGLFDGDTDDAELAFQYAVEAVNNEKLSYSNYQLEAQAVQVKYGDQFDVSKKLCRLLKTGVA 115

  Fly    95 AIFGPQSSHTASHVQSICDNMEIPHLENRWDYRLRRESCLVNLYPHPNTLSKAYVDIVRHWGWKT 159
            .||||.|..:|.||||:||..|:||:|.|||...:..:  :||:|||:.:.:.::|:|..:.||.
Mosquito   116 GIFGPSSPKSALHVQSVCDEKEMPHIETRWDAYTKLPT--LNLHPHPHIMGRVFLDLVVAFEWKD 178

  Fly   160 FTIIYENNDGIVRLQELLKAHGMTPFPITVRQ--LSDSGDYRPLLKQIKNSAEAHIVLDCSTERI 222
            |||:||:...:..:.:|||.:....:.:||||  |..:|:||.:|:::|.|.:..|:|.||.|.:
Mosquito   179 FTILYESGPWLPGISDLLKMYDPKGYTVTVRQLDLGLNGNYRAVLRRVKLSEDKRIILACSIESM 243

  Fly   223 HEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEFRYGGTNITGFRLIN---EKI--VSDVVRQWS 282
            .||||||||:|:::|:|..::|||||||::|:.::|.||||||.|||:   |||  |:|.:....
Mosquito   244 PEVLKQAQQVGLLTDHHQIIITSLDLHTIDLEPYQYSGTNITGVRLIDPEEEKIKQVADFLNASQ 308

  Fly   283 IDEKGLLRSA-NLTTVRSETALMYDAVHLFAKAL-HDLDTSQQIDIHPIS--CDGQSTWQHGFSL 343
            |.:...|... |...:|.:||||||||.|||:|| |.:.:.....:.|||  ||..:||::|:|:
Mosquito   309 IAKTLELHDGLNPAKMRVKTALMYDAVLLFAEALKHLIGSEPPRLLEPISLKCDDPTTWKNGYSV 373

  Fly   344 INYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQE 408
            |||||...:.|||..|||||||.|:||:||::||.|||:.|:|.||||  :|:||||...|....
Mosquito   374 INYMKSSTIHGLTRSIKFDHQGHRSDFLLDLIELGPAGLEKVGVWNST--EGLNFTRKTEQAAHA 436

  Fly   409 I-EANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGS 472
            : :..|:|:|.:|.|.:|.||.|.|:|.|.||||::|||:.:|||||:|..|||||...|..||.
Mosquito   437 MDDGTLQNRTFLVLTAISPPYGMLKDSPIKLSGNERFEGFGIDLIHELSLMLGFNYTFILQEDGV 501

  Fly   473 YGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNL 537
            |||||:.|.:||||::||||.||||||.|||||.:||.|||||.||||||:|||:|||.|:||:|
Mosquito   502 YGSLNRDTKKWNGMVQELLEWRADLAITDLTITSDRESAVDFTMPFMNLGISILFRKPTKEPPSL 566

  Fly   538 FSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEW--PAYTDAHGEKVESQFTLLNCMWFAIG 600
            |||:||.|..||:|:..||:.||:.||:|.:.:|.||  |.......|::|:||:..|.|||.||
Mosquito   567 FSFMSPFSKQVWLYLGGAYMMVSMSLFVLGRISPKEWDNPYPCIEEPEELENQFSFSNSMWFTIG 631

  Fly   601 SLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQ-TRIK 664
            :|:|||.:..|||.:||.||.|||||||||:||||||||||||||::.|||.:|||||.. ..:|
Mosquito   632 ALLQQGSEIAPKAPATRAVASIWWFFTLIMVSSYTANLAAFLTVEQVVSPINNAEDLAAAGGAVK 696

  Fly   665 YGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSYAFLMESTSIEY 729
            |||.:.|||.:||:|::..||.:|:.|| .|...:.|:||.||::||.  ..:||||||||||||
Mosquito   697 YGAKRDGSTISFFKDAEYGTYAKMYQFM-MANQDLLTSSNPEGLQRVK--TENYAFLMESTSIEY 758

  Fly   730 VTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGKCR 794
            :.||.|::||:||:||.|.||||...|||||:|::..:|:|||:|.|..||.||||||||||.| 
Mosquito   759 IVERECDVTQIGGLLDDKGYGIAMRKNSPYRSALSEAVLRLQEQGVLTSLKRKWWKEKRGGGAC- 822

  Fly   795 VETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFV 835
             |.:.....|..|.|||||||||:|:.|...|..::.||.:
Mosquito   823 -ENTMEEGGALALELANVGGVFVLLIVGCVAALFVSFCEML 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..400 CDD:380605 173/379 (46%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:473866 217/372 (58%)
LOC1273165XP_061503118.1 None

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