DRSC/TRiP Functional Genomics Resources

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Protein Alignment KaiR1D and Ir8a

DIOPT Version :10

Sequence 1:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_061519126.1 Gene:Ir8a / 1272638 VectorBaseID:AGAMI1_006137 Length:392 Species:Anopheles gambiae


Alignment Length:285 Identity:93/285 - (32%)
Similarity:145/285 - (50%) Gaps:41/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   588 QFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIE 652
            :|||....|||:.|...||....|||||.|.:...:|.|.::|::::|||||||||||||.:|::
Mosquito    19 KFTLKESFWFALTSFTPQGGGEAPKALSGRTLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQ 83

  Fly   653 SAEDLAKQTRIKYGALKGGSTAAFFRDSKIS---TYQ----------------RMWSF------- 691
            |.|.|::|:||||..:|...|..:||:.|.:   .||                |:|.:       
Mosquito    84 SLEQLSRQSRIKYTVVKDSDTHDYFRNMKNAEDVLYQMWRNLTLSSGNDQAQYRVWDYPIKEQYI 148

  Fly   692 -----MESARPSVFTASNGEGVERV-AKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYG 750
                 :|||.|   .|:..||..|| .:....:||:.:|..|.|...|||..|:||.:...:.||
Mosquito   149 NILSAIESANP---VATAAEGFRRVNERLDADFAFIHDSAEIRYEISRNCNFTEVGEVFAEQPYG 210

  Fly   751 IATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGV 815
            ||....|..:..::..||:||:|.....|..|:|... ...:|     .::..:..:.|.::|||
Mosquito   211 IAVQQGSHLQDELSYFILELQKERYFESLTAKFWNNS-ARSQC-----PNTDDSEGITLESLGGV 269

  Fly   816 FVVLMGGMGVACVIAVCEFVWKSRK 840
            |:..:.|:.:|.:..:.|.::..||
Mosquito   270 FIATLVGLALAMITLLGEVIYYRRK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..400 CDD:380605
Periplasmic_Binding_Protein_Type_2 415..785 CDD:473866 81/228 (36%)
Ir8aXP_061519126.1 None
Blue background indicates that the domain is not in the aligned region.

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