Protein Alignment KaiR1D and grik3

DIOPT Version :9

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: XP_031752773.1
• Gene: grik3 / 100498426
• XenbaseID: XB-GENE-6050069
• Length: 919
• Species: Xenopus tropicalis
• Alignment Length: 854
• Identity: 400/854 - (46%)
• Similarity: 579/854 - (67%)
• Gaps: 49/854 - (5%)

  Fly    21 RKAQSLPDIIKIGGLFHPAD-------DHQELAFRQAVDRINADRSILPRSKLVAQIERISPFDS 78
            :..|.:|.:|:|||:|...:       ..:|.|||.:...||.:|::||.:.|...|:||:.:||
 Frog    27 QSCQGMPHVIRIGGIFEHLEGPTGQLVSAEEQAFRFSASIINRNRTLLPNTTLTYDIQRINLYDS 91

  Fly    79 FHAGKRVCGLLNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWDYRL--RRESCLVNLYPHP 141
            |.|.::.|..|.:||.|||||..|.:::.|||||:.:|:||::.||.:..  .|:|..|||||..
 Frog    92 FEANRKACDQLALGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRWKHHPLDNRDSFYVNLYPDY 156

  Fly   142 NTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQL-SDSGDYRPLLKQI 205
            .:||.|.:|:|:...|::.|::|:::.|::|||||:.|.......:.:||| .:|.|.|||||::
 Frog   157 ASLSHAILDLVQFLKWRSATVVYDDSTGLIRLQELIMAPARYNIRLKIRQLPPESEDARPLLKEM 221

  Fly   206 KNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEFRYGGTNITGFRLIN 270
            |...|..|:.|||.....::|:||..:|||::|:.|:.|:|||:.::|:.:||.|.|:||||::|
 Frog   222 KRGREFRIIFDCSHTMAAQILRQAMAMGMMTEYYHYIFTTLDLYALDLEPYRYSGVNLTGFRILN 286

  Fly   271 --EKIVSDVVRQWSID--------EKGLLRSANLTTVRSETALMYDAVHLFAKALHDLDTSQQID 325
              ...||.:|.:||::        |.||| ...:||   :.||.|||||:.:..   ...:.|:.
 Frog   287 VDNPYVSSIVDKWSMERHQATPKPESGLL-DGIMTT---DAALTYDAVHIVSVC---YQRAPQMT 344

  Fly   326 IHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDH-QGFRTDFMLDIVELTPAGIRKIGTWN 389
            ::.:.|.....|:.|...:|::|..:.:|||..|.|:. .|.||||.|||:.|...|:.|:||||
 Frog   345 VNSLQCHRHKAWRFGSRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGTWN 409

  Fly   390 STLPDGINFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHE 454
            .:  ||:|.|.|...:...|..:|.|:||:|||:|..||.|.|.|..||.|.|:|||:.:||:.:
 Frog   410 PS--DGLNITETARGRGPNISESLTNRTLIVTTVLEEPYVMFKRSDTPLFGKDRFEGFCIDLLKK 472

  Fly   455 ISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFM 519
            |::.|||:|.|:||.|..|||.:: .|:|||:::||::.:||||:|.||||..||:.:||:.|||
 Frog   473 IAEILGFDYDIRLVEDAKYGSQDE-KGQWNGLVKELIDHKADLAVAPLTITHVREKVIDFSKPFM 536

  Fly   520 NLGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAH--- 581
            .||:||||||.....|::||||:|||.|:|:|:..||||||.:||::|:|:||||   .|||
 Frog   537 TLGISILYRKANGTAPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEW---YDAHPCN 598

  Fly   582 --GEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTV 644
              .:.||:.|||||..|||:|:|||||.:.:|||||||::.|||||||||:||||||||||||||
 Frog   599 PGTDVVENNFTLLNSFWFAVGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTV 663

  Fly   645 ERMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVE 709
            |||:|.|:||:||||||:|:|||:..|:|..||:.|.|||:::||:|| |:|||....||.||::
 Frog   664 ERMESAIDSADDLAKQTKIEYGAVVDGATMNFFKKSHISTFEKMWAFM-SSRPSALVKSNEEGIQ 727

  Fly   710 RVAKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEG 774
            ||.  ...||.|||||:|||:|:|||.|||:||::|:|.|||.||..||||..|:..||:|||..
 Frog   728 RVL--SADYALLMESTAIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDRISIAILQLQEAD 790

  Fly   775 KLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSR 839
            ::|.:|.:||   |.|| |..|.:|.:||   ||:.|:||:|:||.||:.::.|:|:.|||:|.|
 Frog   791 EIHKMKERWW---RSGG-CPEEKNKEASA---LGIQNMGGIFIVLAGGLILSVVVAMAEFVYKLR 848

  Fly   840 KVAVEERLS 848
            |.|..|:.|
 Frog   849 KTAEREQRS 857

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..397	CDD:107377	147/386 (38%)
		ANF_receptor	42..378	CDD:279440	134/349 (38%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:304360	215/374 (57%)
		Lig_chan	547..823	CDD:278489	162/280 (58%)
grik3	XP_031752773.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	257	1.000	Domainoid score	I1977
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	790	1.000	Inparanoid score	I503
OMA	1	1.010	-	-		QHG60082
OrthoDB	1	1.010	-	-		D60688at33208
OrthoFinder	1	1.000	-	-		FOG0000021
OrthoInspector	1	1.000	-	-		otm47932
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.980