Protein Alignment KaiR1D and grik2

DIOPT Version :10

• Sequence 1: NP_650925.1
• Gene: KaiR1D / 42473
• FlyBaseID: FBgn0038837
• Length: 853
• Species: Drosophila melanogaster
• Sequence 2: XP_017949808.1
• Gene: grik2 / 100495093
• XenbaseID: XB-GENE-5902331
• Length: 913
• Species: Xenopus tropicalis
• Alignment Length: 853
• Identity: 406/853 - (47%)
• Similarity: 585/853 - (68%)
• Gaps: 41/853 - (4%)

  Fly    24 QSLPDIIKIGGLFHPADD----HQELAFRQAVDRINADRSILPRSKLVAQIERISPFDSFHAGKR 84
            |....:::.||:|...:.    .:|||||.||:.||.:|::||.:.|....:||:.:|||.|.::
 Frog    35 QGTTHVLRFGGIFEYVESGPFGAEELAFRFAVNTINRNRTLLPNTTLTYDTQRINLYDSFEASRK 99

  Fly    85 VCGLLNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWDYRL--RRESCLVNLYPHPNTLSKA 147
            .|..|::||||||||..|.:|:.|||||:.:.:||::.||.:::  .::|..|:|||..::||:|
 Frog   100 ACEQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRA 164

  Fly   148 YVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQLS-DSGDYRPLLKQIKNSAEA 211
            .:|:|:.:.|||.||.|:::.|::|||||:||.......:.:|||. |:.|.:||||::|...|.
 Frog   165 ILDLVQFFKWKTVTIAYDDSTGLIRLQELIKAPSRYNLRLKIRQLPIDTKDAKPLLKEMKRGKEF 229

  Fly   212 HIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEFRYGGTNITGFRLIN--EKIV 274
            |::.|||.:....:||||..:|||::|:.|:.|:|||..::::.:||.|.|:||||::|  ...|
 Frog   230 HVIFDCSHDMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNIENSQV 294

  Fly   275 SDVVRQWSID--------EKGLLRSANLTTVRSETALMYDAVHLFAKALHDLDTSQQIDIHPISC 331
            ..::.:||::        :.||| ...:||   :.||||||||:.:.|:...   .|:.:..:.|
 Frog   295 LSIIEKWSMERLQAPPKPDSGLL-DGFMTT---DAALMYDAVHVVSVAVQQF---PQMTVSSLQC 352

  Fly   332 DGQSTWQHGFSLINYMKIVEMKGLTNVIKFDH-QGFRTDFMLDIVELTPAGIRKIGTWNSTLPDG 395
            :....|:.|...|:.:|....:|||..|.|:. .|.||||.||::.|...|:.|||||:.|  .|
 Frog   353 NRHKPWRFGARFISLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPT--SG 415

  Fly   396 INFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLG 460
            :|.|.....|...|..:|.|::|:|||||..||.|.|:|..||.|..:||||.:||:.::||.||
 Frog   416 LNMTENQKGKPANITDSLSNRSLIVTTILEEPYVMFKKSDKPLYGKARFEGYCIDLLEKLSKILG 480

  Fly   461 FNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSI 525
            |.|:::||.||.||:.:..|.:||||:|||::.:||||:|.|.||:.|||.:|||.|||.||:||
 Frog   481 FEYEVRLVEDGKYGAKDDTTQQWNGMVRELMDHKADLAVAPLAITYVREQVIDFTKPFMTLGISI 545

  Fly   526 LYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEW--PAYTDAHGEKVESQ 588
            |||||....|.:||||:|||.|:|:|:..||||||.:||::|:|:||||  |...:...:.||:.
 Frog   546 LYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENN 610

  Fly   589 FTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIES 653
            |||||..||.:|:|||||.:.:|||||||:|.|||||||||:|||||||||||||||||:|||:|
 Frog   611 FTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 675

  Fly   654 AEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSY 718
            |:||||||:|:|||::.|:|..||:.|:|.||::||:||.|...||...:|.||::||.  ...|
 Frog   676 ADDLAKQTKIEYGAVQDGATMTFFKKSRIPTYEKMWAFMNSRSQSVLVKNNEEGIQRVL--TSDY 738

  Fly   719 AFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKW 783
            |||||||:||:||:|||.|||:||::|:|.||:.||..||||..|...||:|||||.||::|.||
 Frog   739 AFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGVLHMMKEKW 803

  Fly   784 WKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRKVA-VEER- 846
            |   ||.| |..|.||.:||   ||:.|:||:|:||..|:.::..:||.||::||:|.| :|:|
 Frog   804 W---RGNG-CPEEESKEASA---LGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRS 861

  Fly   847 -LSAILNE 853
             .||::.|
 Frog   862 FCSAMVEE 869

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
KaiR1D	NP_650925.1	PBP1_iGluR_Kainate	31..400	CDD:380605	149/386 (39%)
		Periplasmic_Binding_Protein_Type_2	415..785	CDD:473866	220/371 (59%)
grik2	XP_017949808.1	PBP1_iGluR_Kainate	42..419	CDD:380605	149/385 (39%)
		Periplasmic_Binding_Protein_Type_2	435..805	CDD:473866	221/374 (59%)