DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and GLR2.5

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001332219.1 Gene:GLR2.5 / 830991 AraportID:AT5G11210 Length:918 Species:Arabidopsis thaliana


Alignment Length:968 Identity:185/968 - (19%)
Similarity:314/968 - (32%) Gaps:362/968 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SACLLLLAGLQLSILVPTEANDFSSFLSANASL---------AVVVDHEYMTVHGENILAHFEKI 64
            ||...||..|:....:....:|.|...:.:|.:         .:.||:|:    ||.||.:    
plant   132 SATSPLLDSLRSPYFIRATHDDSSQVQAISAIIESFRWREVVPIYVDNEF----GEGILPN---- 188

  Fly    65 LSDVIRENLRNGGINVKYFSWNAVRLKKDFLAAITVTDCENTWNFYK-NTQETSILLIAITDSDC 128
            |.|..:|      |||:....:|:.|.        .:|.:.....|| .|..|.:.::.      
plant   189 LVDAFQE------INVRIRYRSAISLH--------YSDDQIKKELYKLMTMPTRVFIVH------ 233

  Fly   129 PRLPLNRALMVPIVENGDEFPQLILDAKVQQILNWKTAVVFVDQTILEENALLVKSIVHESITNH 193
                     |:|     |...:|.                    :|.:|..:|.|..|. .:||.
plant   234 ---------MLP-----DLGSRLF--------------------SIAKEIDMLSKGYVW-IVTNG 263

  Fly   194 ITPISLILYEINDSLRGQQKRVALRQAL---SQFAPKK---HEEMRQQFLVISAFHEDIIEIAET 252
            |..:.        |:.|:...|.:...|   :.||..|   |.|.|.|    ..|.      .|.
plant   264 IADLM--------SIMGESSLVNMHGVLGVKTYFAKSKELLHLEARWQ----KRFG------GEE 310

  Fly   253 LNMFHVGNQWMIFVLDMVARDFDAGT-VTINLDEGANIAFALNET-DPNCQDSLNCTISEISLA- 314
            ||.|..   |.          :||.| :.::::|..::..:.|.| :...:|.:...:.|:.:| 
plant   311 LNNFAC---WA----------YDAATALAMSVEEIRHVNMSFNTTKEDTSRDDIGTDLDELGVAL 362

  Fly   315 ----LVNAISKITVEEESIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVE 375
                |::|:|  ||..:.:.|          ||                                
plant   363 SGPKLLDALS--TVSFKGVAG----------RF-------------------------------- 383

  Fly   376 TAITWGKSQENRKFRSTPQRDAKNRNFEFINI--------GYWTPVLGFVCQELAFPHIEHHFRN 432
                   ..:|.|..:|        .|:.|||        |:|...:|.| :.|....:.|..|.
plant   384 -------QLKNGKLEAT--------TFKIINIEESGERTVGFWKSKVGLV-KSLRVDKVSHSSRR 432

  Fly   433 ITMDIL---TVHNPP-WQI----------------------LTKNSNGVIVEHKGIVME----IV 467
            :...|.   |:..|. |:.                      :||:.|..:....|..::    ::
plant   433 LRPIIWPGDTIFVPKGWEFPTNAKKLRIAVPKKDGFNNFVEVTKDENTNVPTVTGFCIDVFNTVM 497

  Fly   468 KELSRALNFSYYLHEASAWKEE---DSLSTSAGGNESDELVGSMT----------FRIPYRVVEM 519
            .::..|:::.|...:....|..   |.:..:....|.|..||..|          |.:||....:
plant   498 SQMPYAVSYEYIPFDTPDGKPRGSYDEMVYNVFLGEFDGAVGDTTILANRSHYVDFALPYSETGI 562

  Fly   520 VQGNQFFIAAVAATVEDPDQKPFNYTQPISVQKYSFITRKPDEVSRIYLFTAPFTVETW------ 578
            |    |.:     .|:|..:|                        ..::|..|.|.|.|      
plant   563 V----FLV-----PVKDGKEK------------------------GEWVFLKPLTKELWLVTAAS 594

  Fly   579 FCLMGIILLTAPTLYAINRLAPLKEMRIVGLSTVKSCFWYIFGALLQQGGMYLPTADS--GRLVV 641
            |..:||::    .::........:|..|:  ..:.|.|::.|..|.   ..:...::|  .|::|
plant   595 FLYIGIMV----WIFEYQADEEFREQMII--DKISSVFYFSFSTLF---FAHRRPSESFFTRVLV 650

  Fly   642 GFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDHKDIVQYGLRNGTF-FERYVQSTTRE 705
            ..|..|:::|..:|...|.:.||..:.:|.|.:::.|  .|..|..|.:.|:| |||..|....|
plant   651 VVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDL--RKSGVNIGYQTGSFTFERLKQMRFDE 713

  Fly   706 DFKHYLERAKIYGSAQE------------------EDIEAVK----------------------- 729
                  .|.|.|.|.:|                  :::..:|                       
plant   714 ------SRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFMAKYCSEYSIIEPTFKADGFG 772

  Fly   730 -------------RGERINIDWRINLQLIVQRHFEREKEC--------HFALGRESFVDEQIAMI 773
                         ..:.:||.....::.|..:.|..||.|        ...|...||  |.:.:|
plant   773 FAFPLGSPLVSDISRQILNITEGDAMKAIENKWFLGEKHCLDSTTSDSPIQLDHHSF--EALFLI 835

  Fly   774 VPAQSAYLHLVNRHIKSMFRMGFIERWHQM--NLPSAGKCNGKSAQRQVTNHKVNMDD 829
            |...|..|.|:     .:...|:.||.|..  |||:.   ...:||.:| |.:.|:.|
plant   836 VFVVSVILLLL-----MLASRGYQERQHNASPNLPND---QANAAQEEV-NEEGNVGD 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 59/319 (18%)
Lig_chan 576..836 CDD:306551 69/327 (21%)
GLR2.5NP_001332219.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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