DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and GLR2.4

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001328410.1 Gene:GLR2.4 / 829299 AraportID:AT4G31710 Length:912 Species:Arabidopsis thaliana


Alignment Length:865 Identity:154/865 - (17%)
Similarity:280/865 - (32%) Gaps:264/865 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KNTQETSILLIAITDSDCPRLPLNRALMVPIVENG----------DEFPQLILDAKVQQILNWKT 165
            :.|.:.|.::.....|..|.:..:..  .|.:::|          |:..|:...:::.::..|:.
plant   127 RTTMQASFVIEVGQKSQVPIISFSAT--SPFLDSGRSPYFFRSTYDDSSQVQAISEIIKVFGWRE 189

  Fly   166 AVVFVDQTILEENALLVKSIVHESITNHITPISLILYEINDSLRGQQKRVALRQALSQFAPKKHE 230
            .|     .:.|.||.      .|.|...:|          |:|:....|:..|..:|..|.....
plant   190 VV-----PVYENNAF------GEGIMPGLT----------DALQAINIRIPYRTVISPNATDDEI 233

  Fly   231 EM----------------RQQFLVISAFHEDIIEIAETLNMFHVGNQWMIF--VLD----MVARD 273
            .:                ..:||....|.:     |....:...|..|::.  |:|    |...|
plant   234 SVDLLKLMTKPTRVFVVHMNRFLASRVFSK-----ARETGLMKQGYAWILTNGVIDHLVLMNGTD 293

  Fly   274 FDA--GTVTINLDEGANIAFALNETDPNCQDSLNCTISEISLALVNAISKITVEEESIYGEISDE 336
            .:|  |.:      |....|.::|       .|....|.::.|       ..|.|.:|||..:.:
plant   294 IEAMQGVI------GIRTHFPISE-------ELQTFRSRLAKA-------FPVSELNIYGLRAYD 338

  Fly   337 EWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGKSQENRK-FRSTPQRDAKNR 400
            ...|:....:|...           ||...|......:........|:...| .||..|...|..
plant   339 ATTALAMAVEEAGT-----------TNLTFSKMDGRNISDLEALSVSEYGPKLIRSLSQIQFKGL 392

  Fly   401 N--------------FEFIN--------IGYWTPVLGFVCQELA--------FPHIEHHFRNITM 435
            :              ||.:|        :|:||...|.| ::|:        |...::|...|..
plant   393 SGDYHFVDGQLHASVFEIVNVIDGGGILVGFWTQDKGLV-KDLSPSSGTTRTFSSWKNHLNPILW 456

  Fly   436 DILTVHNPP-WQILTKNSNGVIVEHKGIVMEIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGN 499
            ..:|:..|. |:|.|......|....|...:.||..:..|.     ||        ::.|....:
plant   457 PGITLTVPKGWEIPTNGKELQIGVPVGTFPQFVKVTTDPLT-----HE--------TIVTGFCID 508

  Fly   500 ESDELVGSMTFRIPYRVV----EMVQGNQFFIAAVAATVEDPDQKPFNYTQPISVQKYSFITRKP 560
            ..:.::.:|.:.:.:|.:    :..:.|...|.|..::..|       :|.|.:......:....
plant   509 FFEAVIQAMPYDVSHRFIPFGDDDGKTNDTTILANRSSYVD-------FTLPYTTSGVGMVVPLK 566

  Fly   561 DEVSRIYL-FTAPFTVETW------FCLMGIIL----------LTAPTLYAINRLAPLKEMRIVG 608
            |.|:|..| |..|.|...|      |.::|.::          .|.|..|.|:.:          
plant   567 DNVARSSLIFFKPLTPGLWGMTLGSFFVVGFVVWILEHRVNSEFTGPPQYQISTM---------- 621

  Fly   609 LSTVKSCFWYIFGALLQQGGMYLP----TADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQ 669
                   ||:.|..:     ::.|    .:.:.|:||..|:.:|:||..:|..:|.:.||..:..
plant   622 -------FWFAFSIM-----VFAPRERVMSFTARVVVITWYFIVLVLTQSYTASLSSLLTTQQLN 674

  Fly   670 PGVDYLNQLEDHKDIVQYG--------------LRNGTFFE-RYVQSTTREDFKHYLERAKIYGS 719
            |....:      |:::..|              ||...|.| |.|..|:.|..:..|.:....|.
plant   675 PTETSI------KNVLAKGGPVAYQRDSFVLGKLRESGFPESRLVPFTSPEKCEELLNKGPSKGG 733

  Fly   720 AQEEDIEA----------VKRGERINIDWRINLQLIVQRHFEREKECHFALGRESFVDEQIAMIV 774
            .....:|.          .|:.:.:.:.:.::....|           |.:|.....|...|::.
plant   734 VSAAFMEVPYVRVFLGQYCKKYKMVEVPFDVDGFGFV-----------FPIGSPLVADVSRAILK 787

  Fly   775 PAQS--------AYLHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQ 831
            .|:|        |:...:::....           .||.|....        .|:..|:::|...
plant   788 VAESNKATQLETAWFKNIDKTCPD-----------PMNNPDPNP--------TVSFRKLSLDSFL 833

  Fly   832 GCFLVLLLGFTLALL--IVC 849
            ..|:......|||||  ::|
plant   834 LLFVAAATVCTLALLKFVIC 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 59/308 (19%)
Lig_chan 576..836 CDD:306551 52/312 (17%)
GLR2.4NP_001328410.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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