DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and GLR3.5

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001324013.1 Gene:GLR3.5 / 817800 AraportID:AT2G32390 Length:953 Species:Arabidopsis thaliana


Alignment Length:945 Identity:178/945 - (18%)
Similarity:328/945 - (34%) Gaps:313/945 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LAGLQLSILVPTEAN---------DFSSFLSANASLAVVVDHEYMTVHGENILAHFEKILSDVIR 70
            |:.||....:.|..|         ||.|:......:|:.||.||    |.|.::    :|.|.:.
plant   149 LSSLQYPYFLRTTQNDYFQMNAITDFVSYFRWREVVAIFVDDEY----GRNGIS----VLGDALA 205

  Fly    71 ENLRNGGINVKYFSWNAVRLKKDFLAAITVTDCENTWNFYKNTQETSI--LLIAITDSDCPRLPL 133
            :.                |.|..:.||           |......:||  ||.::      .|..
plant   206 KK----------------RAKISYKAA-----------FPPGADNSSISDLLASV------NLME 237

  Fly   134 NRALMVPIVENGDEFPQLILDAKVQQILN----WKTA----VVFVDQTILEENAL-LVKSIVHES 189
            :|..:|.:  |.|....:...||...::.    |.|.    ........|:..|| |::.:|   
plant   238 SRIFVVHV--NPDSGLNIFSVAKSLGMMGSGYVWITTDWLLTALDSMEPLDPRALDLLQGVV--- 297

  Fly   190 ITNHITPISLILYEINDSLRGQQKRVALRQALSQFAPKKHEEMRQQFLVISAFHEDIIEIAETLN 254
            ...|.||.|    :.....:|:.|.:..:::|      |.::         .|            
plant   298 AFRHYTPES----DNKRQFKGRWKNLRFKESL------KSDD---------GF------------ 331

  Fly   255 MFHVGNQWMIFVLD---MVARDFDAGTVTINLDEGANIAFALNETDPNCQDSLNCTISEISLALV 316
                 |.:.::..|   :|||..|     :...:|..:.|:   .||:.:::.:..|.       
plant   332 -----NSYALYAYDSVWLVARALD-----VFFSQGNTVTFS---NDPSLRNTNDSGIK------- 376

  Fly   317 NAISKITVEEESIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWG 381
              :||:.:..|   ||                     .:::..|:.|           .|.:|..
plant   377 --LSKLHIFNE---GE---------------------RFLQVILEMN-----------YTGLTGQ 404

  Fly   382 KSQENRKFRSTPQRDAKN-RNFEFINIGYWTPVLGFVCQELAFPHIEHHFRNITM-------DIL 438
            ....:.|.|..|..|..| ::...:.:|||:...||   .:|.|...:...:.|.       :|:
plant   405 IEFNSEKNRINPAYDILNIKSTGPLRVGYWSNHTGF---SVAPPETLYSKPSNTSAKDQRLNEII 466

  Fly   439 ---TVHNPP--W--------------------QILTKNSNGVIVEHKGIVMEIVKELSRALNF-- 476
               .|..||  |                    ...:|:.|.:.|  ||..::|.:...:.|.:  
plant   467 WPGEVIKPPRGWVFPENGKPLKIGVPNRVSYKNYASKDKNPLGV--KGFCIDIFEAAIQLLPYPV 529

  Fly   477 --SYYLH-EASAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAA---VAATVE 535
              :|.|: :.......|:|.:....|..|..||.:|. |..| .:.|...|.||.:   |.|.|:
plant   530 PRTYILYGDGKKNPSYDNLISEVAANIFDVAVGDVTI-ITNR-TKFVDFTQPFIESGLVVVAPVK 592

  Fly   536 DPDQKPFNYTQPISVQKYSFITRKPDEVSRIYLFTAPFTVETWFCLMGIILLTAPTLYAIN---- 596
            .....|::                         |..|||:|.|.....:.|.....::.:.    
plant   593 GAKSSPWS-------------------------FLKPFTIEMWAVTGALFLFVGAVIWILEHRFN 632

  Fly   597 ---RLAPLKEMRIVGLSTVKSCFWYIFGALLQQGGMYLPTADS-----GRLVVGFWWIVVIVLVT 653
               |..|.:::..|        ||:.|..      |:....::     ||.|:..|..||:::.:
plant   633 EEFRGPPRRQIITV--------FWFSFST------MFFSHRENTVSTLGRFVLLVWLFVVLIINS 683

  Fly   654 TYCGNLVAFLTFPKFQPGVDYLNQLEDHKDIVQYGLRNGTFFERYVQSTTREDFKHYLERAKIYG 718
            :|..:|.:.||..:....::.::.|....:.:  |:::|||..:::.:...      :..::|..
plant   684 SYTASLTSILTVQQLTSRIEGMDTLIASNEPI--GVQDGTFAWKFLVNELN------IAPSRIIP 740

  Fly   719 SAQEED-IEAVKRGER--------------------INIDWRINLQLIVQRHFEREKECHFALGR 762
            ...||: :.|::||.|                    .|..:|     .|.:.|.| ....||..|
plant   741 LKDEEEYLSALQRGPRGGGVAAIVDELPYIKALLSNSNCKFR-----TVGQEFTR-TGWGFAFQR 799

  Fly   763 ES--FVDEQIAMIVPAQSAYLHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKV 825
            :|  .||...|::..|:...|..:.:            :|    |....:|..:.:..:  |:::
plant   800 DSPLAVDMSTAILQLAEEGKLEKIRK------------KW----LTYDHECTMQISDTE--NYQI 846

  Fly   826 NMDDMQGCFLVLLLGFTLALLIVCGE-FW-YRRFR 858
            ::....|.||:..:.:.:||.:.|.: || |:|.|
plant   847 SVQSFWGLFLICGVVWFIALTLFCWKVFWQYQRLR 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 61/319 (19%)
Lig_chan 576..836 CDD:306551 52/294 (18%)
GLR3.5NP_001324013.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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