DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and grik5

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:973 Identity:193/973 - (19%)
Similarity:355/973 - (36%) Gaps:265/973 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLAGLQLSILVPTEANDFSSFLS-----ANASLAVVVDHEYMTVHGENILAHFEKILSDVIRENL 73
            ||..:....|:.|......|.||     ::..:|.::|...:...||.:.....:...:.:.||.
Zfish     7 LLLSIYFRFLLVTVVTMPPSSLSQTPVLSSVRMAAILDDSSVCGRGERLALALARENINSVMENP 71

  Fly    74 RNGGINVKYFSWNAVRLKKDFLAAITVTDCE----------------NTWNFYKN-TQETSILLI 121
            ....:.|..|     .|:||.....|.|.|:                .:.:...: ..|..|..:
Zfish    72 ARARVEVDIF-----ELQKDSQYETTDTMCQILPKGVVSVIGPASSPASGSIVSHICGEKEIPHV 131

  Fly   122 AITDSDCPRLPLNRALMVPIVENGDE-------------FPQL-ILDAKVQQILNWKTAVVFVDQ 172
            .|...:.||||..|...|.:..:.::             :|.. ::.||.:.:|..:.   .:.:
Zfish   132 KIGPEETPRLPYLRFASVTLYPSNEDLSLAIGSILRSFSYPSASLVCAKAECLLRLEE---LIRR 193

  Fly   173 TILEENALLVKSIVHESITNHITPISLILYEINDSLRGQQKRVA-----LRQALSQFAPKKHEEM 232
            .::....|.::     .:.:::.|..| |.||.|.      ::|     ...::|....||..|:
Zfish   194 FLISRETLSIR-----MLDDNLDPTPL-LKEIRDD------KIATIIIDANASISYLILKKASEL 246

  Fly   233 RQQFLVISAFH--------------EDIIEIAETLNMFHVGNQWMIFVLDMV------------- 270
            .    :.|||:              :||::....:..|.:.|....|.|:.:             
Zfish   247 G----MTSAFYKYILTTMDFPLLWLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWREGCDI 307

  Fly   271 ----------ARDFDAGTVTINLDEGANIAFALNETDPNCQDSLNCTISEI---SLALVNAISKI 322
                      |..|||..|.::..:      .||.:.......|:||..:|   ..:|:|.:.  
Zfish   308 NPYPGPALSSALLFDAVHVVVSAVQ------ELNRSQEIGVKPLSCTSPQIWQHGTSLMNYLR-- 364

  Fly   323 TVEEESIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGKSQENR 387
            .||.:.:.|.:                    |:..:..:||.......:.|       |..:|  
Zfish   365 MVEYDGLTGRV--------------------EFNSKGQRTNYTLHILEKHR-------GGHKE-- 400

  Fly   388 KFRSTPQRDAKNRNFEFINIGYW----TPVLGFVCQELAFPHIEHHFRNITMDILTVHNPPWQIL 448
                               ||.|    |.::.....::   ::.....|.::.|.|:...|:.:.
Zfish   401 -------------------IGIWYSNNTLLMNSTSLDI---NVSETLANKSLIITTILENPYVMR 443

  Fly   449 TKN-----SNGVIVEHKGIVMEIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGNES-DELVGS 507
            ..|     .|   .:::|..:::::|||..|.|:|.:...     :|.|..:...|.| ..:||.
Zfish   444 KINYQEFEGN---EQYEGFCVDMLRELSDILKFTYRIKLV-----DDGLYGAPEPNGSWTGMVGE 500

  Fly   508 MTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPFNYTQP-----ISVQKYSFITRKPDEVSRIY 567
            :..|            :..:|..|.|:....:|..::::|     ||:.....|.|||...|   
Zfish   501 LINR------------KADLAVAAFTITSEREKVIDFSKPFMTLGISILYRVHIGRKPGYFS--- 550

  Fly   568 LFTAPFTVETWFCLMGIILLTAPTLYAINRLAP---------LKEMR--IVGLSTVKSCFWYIFG 621
             |..||:...|..::...|..:..|:...||:|         |:|.|  :....|:.:..|:..|
Zfish   551 -FLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPYEWYNPHPCLRERRDLLENQYTLGNSLWFPVG 614

  Fly   622 ALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDHKDIVQ 686
            ..:|||...:|.|.|.|.|.|.||...::::::|..||.||||..:.:..::..:.|.|..:| |
Zfish   615 GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNI-Q 678

  Fly   687 YGLRNG----TFF--ERYVQSTTREDFKHYLERAKIYGSAQEEDIEAVKRGERINIDWRINLQLI 745
            ||..:|    |||  .|| |:..|.....|.::..::..:.||.|..|     :|..:...|: .
Zfish   679 YGTIHGGSTMTFFMNSRY-QTYQRMWNYMYSKQPSVFVKSTEEGIARV-----VNSKYAFLLE-S 736

  Fly   746 VQRHFEREKECH------------FALGR---ESFVDE-QIAMIVPAQSAYLHLVNRHIKSMFRM 794
            ....:.|...|:            :.:|.   ..|.|| .:|::...::..|.::.|        
Zfish   737 TMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDELSLAVLQLQENNRLEILKR-------- 793

  Fly   795 GFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLIVCGEF-WYRR 856
                ||.:     .|||..:...|.   ..:.|:::.|.|:||:.|..:|:.:...|| |..|
Zfish   794 ----RWWE-----GGKCPKEEDHRA---KGLGMENIGGIFVVLICGLIIAVFVAVMEFVWSTR 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 75/295 (25%)
Lig_chan 576..836 CDD:306551 69/292 (24%)
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 38..412 CDD:107389 74/453 (16%)
ANF_receptor 55..392 CDD:279440 63/388 (16%)
Periplasmic_Binding_Protein_Type_1 <313..383 CDD:299141 17/97 (18%)
Periplasmic_Binding_Protein_Type_2 427..797 CDD:304360 97/413 (23%)
Lig_chan 558..828 CDD:278489 71/297 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591395
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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