DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and grik1a

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:826 Identity:165/826 - (19%)
Similarity:314/826 - (38%) Gaps:205/826 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PIVENGDEF-----------PQLILDAKVQQILNWK-TAVVFVDQTILEENALLVKSIVHESITN 192
            |.|:|.|.|           .:.|||..:  ...|| ..||:.|.|.|.....|:|:....::..
Zfish   140 PSVDNKDNFYINLYPEYTSISRAILDIVI--FYKWKCVTVVYEDSTGLMRMQELIKAPSKNNLKI 202

  Fly   193 HITPISLILYEINDSLRGQQKRVALRQALSQFAPKKHEEMRQQFLVISAFHEDIIEIAETLNMFH 257
            .|..:         ...|...|..|::.      ||.:|.   :::....::...|:.:.|....
Zfish   203 RIRQL---------PSGGGDSRPLLKEM------KKEKEF---YVIFDCSYQVAAELLKQLMSMG 249

  Fly   258 VGNQWM--------IFVLDMVARDFDAGTVT----INLDEGANIAFALNE-------TDPNCQDS 303
            :..::.        :|.||:....:....:|    :|||: :.:|..:.:       ..|..:..
Zfish   250 MMTEYYHFFFTTLDLFALDLEPYRYSGVNMTAFRLLNLDD-SYVASVIQKWSMERQLAPPKPESG 313

  Fly   304 LNCTISEISLALV-NAISKITVEEESIYGEISDEEWEAIRFTKQEKQA----------EILEYMK 357
            |...|...:.||: :|:..:.|..:           .|.:.|....|.          ..:...|
Zfish   314 LMSGIMTTAAALMYDAVFMVAVASQ-----------RATQMTVSSLQCHRHKPWRYGPRFMNLFK 367

  Fly   358 EFLKTNAKCSSCARW-----RVETAITWGKSQE------NRKFRSTPQR--DAKNR-NFEFINIG 408
            |           |:|     |:....|.|..:|      :.|...|.:|  |..:| |..:..||
Zfish   368 E-----------AQWDGLTGRIVLNKTDGLRKEFNLDLISLKEDGTAKRVADGASRPNKLWTKIG 421

  Fly   409 YWTPVLGFVCQELA-FPHIEHHFRNITMDILTVHNPPWQILTKNSNGVIV---EHKGIVMEIVKE 469
            .|....|....|:. ..:|.....|.|:.:.|:...|: ::.|.|:.|:.   ..:|..::::||
Zfish   422 VWNSYTGLNLTEIKDNKNITDSLANRTLIVTTILENPY-VMYKKSDKVLYGNDRFEGYCLDLLKE 485

  Fly   470 LSRALNFSYYLHEASAWKEEDSLSTS---AGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVA 531
            ||..|.|:|          |..|.|.   ...|:..|..|.:.     .:::.:..    :|...
Zfish   486 LSNILGFTY----------EVKLVTDGKYGAQNDKGEWNGMVR-----ELIDHIAD----LAVAP 531

  Fly   532 ATVEDPDQKPFNYTQPISVQKYSFITRKPDEVS-RIYLFTAPFTVETWFCLMGIILLTAPTLYAI 595
            .|:....:|..::::|......|.:.|||:..: .::.|..|.|.:.|..::...|..:..|:.|
Zfish   532 LTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFVI 596

  Fly   596 NRLAPLK---------EMRIVGLS-TVKSCFWYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIV 650
            .|..|.:         ...:|..: |:.:..|:...||::||...:|.|.|.|::.|.||...::
Zfish   597 ARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIWWFFTLI 661

  Fly   651 LVTTYCGNLVAFLTFPKFQPGVDYLNQLEDHKDIVQYG-LRNG---TFFERYVQSTTREDFKHYL 711
            ::::|..||.||||..:....:|..:.|.....| :|| :|:|   |||::...||        .
Zfish   662 IISSYTANLAAFLTVERMDSPIDSADDLAKQTRI-EYGAVRDGSTMTFFKKSKIST--------Y 717

  Fly   712 ERAKIYGSAQEED--IEAVKRG--ERINIDWRI-----NLQLIVQRHFEREKECHFA-LGRESFV 766
            |:...:.|:::..  ::..|.|  ..:..|:.:     :::.|.||:      |:.. :|  ..:
Zfish   718 EKMWAFMSSRKNTALVKNSKDGITRVLTTDYALLMESTSIEYITQRN------CNLTQVG--GLI 774

  Fly   767 DEQ-----------------IAMIVPAQSAYLHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGK 814
            |.:                 ||::...:...||::.            |:|        .:.||.
Zfish   775 DSKGYGVGTPIGSPYRDKVTIAILQLQEEGKLHMMK------------EKW--------WRGNGC 819

  Fly   815 SAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLIVCGEFWYRRFRAS 860
            ..:.......:.::::.|.|:||..|..|::.:..|||.|:..:.|
Zfish   820 PEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSHKNS 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 69/288 (24%)
Lig_chan 576..836 CDD:306551 60/300 (20%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 62/334 (19%)
ANF_receptor 57..398 CDD:279440 52/300 (17%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 88/425 (21%)
Lig_chan 577..846 CDD:278489 62/305 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591364
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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