DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir93a and grid1b

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:878 Identity:165/878 - (18%)
Similarity:336/878 - (38%) Gaps:166/878 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 NVKYFSWN----AVR-----LKKDFLAAITVTDCENTWNFYKNTQETSILLIAITDS-DCPRLPL 133
            ::||...|    ||:     :.:..||.:|.|.|           .::..|.::||: ..|.|.:
Zfish    63 SIKYIEPNNPFQAVQEACELMTQGILALVTSTGC-----------ASASALQSLTDAMHIPHLYV 116

  Fly   134 NR--------ALMVPIVENGDEF------PQLILDAKVQQI--LNWKTAVVFVD--------QTI 174
            .|        |..:....:|:.:      |..:.|..:..:  |.|:..:||.|        |..
Zfish   117 QRNAEGSPRTACQLNPSPDGERYTLAARPPVRLGDVMLTLVGELRWQKFIVFYDSDYDIRGLQVF 181

  Fly   175 LEENALLVKSIVHESITNHITPISLILYEINDSLRGQQ---KRVALRQALSQFAPKKHEEMRQQF 236
            |::.:.....:..:.:..:|:.:...|:   .|:|.::   .|..||:|:...:|:..:....|.
Zfish   182 LDQTSRQGLDVSLQRVDRNISGVFSSLF---TSMRTEELNRYRDTLRRAILLLSPRGAQVFIHQA 243

  Fly   237 LVIS--------AFHEDIIEIAETLNMFH--VGNQWMIFVLDMVARDFDAGTVTINLDEGANIAF 291
            :..:        .|..:.|...|.|.:.|  :|...::..:..:.||.....    :.....|:.
Zfish   244 VETNLASKDSHWVFVNEEISDTEILELAHSSLGRMTVVRQIFPLWRDSSVSC----MRNSHRISS 304

  Fly   292 ALNETDPNCQDSL---NCTISEISLALVNAISKITVEEESIYGEISDEEWEAI-------RFTK- 345
            .|.:.......||   |..:.:..|.|.||          .|.::.|.:|.::       :.|| 
Zfish   305 LLCDPQEGYLQSLEVSNLYLYDSVLMLANA----------FYRKLEDRKWHSMASLNCIRKSTKP 359

  Fly   346 -----------QEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGKSQENRKFRSTPQRDAKN 399
                       |:.:...|..:.:|::..:  :|..::.:     .|.|     |..|..:|.| 
Zfish   360 WNGGWSMLETIQKGRITGLTGIMDFMENGS--NSHVQFEI-----LGTS-----FSETFGKDIK- 411

  Fly   400 RNFEFINIGYWTPVLGFVCQELAFPHIEHHFRNITMDILTVHNPPWQILTKNSNGVIVEHKGIVM 464
                  .:..|..|.| :...|....||:..:.:|:.::|:...|:.::.:|..|....:||..:
Zfish   412 ------RLATWDSVHG-LNGSLKESRIENGMQGVTVKVVTLLEDPFVMVAENILGQPKRYKGFSI 469

  Fly   465 EIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAA 529
            ::::.|::.|.|.|.:::.:..|....||..:......||:                ..:..:|.
Zfish   470 DVLEALAKILGFKYDIYQVADSKYGSQLSNGSWNGMIGELI----------------NKRADLAV 518

  Fly   530 VAATVEDPDQKPFNYTQPISVQKYSFITRKPDEVSRIYLFTAPFTVETWFCLMGIILLTAPTLYA 594
            .|.|:....:...::::.........:.|||:|...|:...|||.:..|.|:...|.:....::.
Zfish   519 SAITITPERENVVDFSKRYMDYSVGILHRKPEEKINIFSLFAPFDLAVWACIAAAIPVVGVLIFL 583

  Fly   595 INRLAPLKEMRIVGL-------STVKSCFWYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLV 652
            :.|:..|:.....|.       :::.|..|.::||.:||||..:..:.:.|:|:|.||:..:::.
Zfish   584 LTRMQMLRSQNPPGAHHASSMSNSLHSAIWIVYGAFVQQGGDSVVGSVALRIVMGSWWLFTLIVC 648

  Fly   653 TTYCGNLVAFLTFPKFQPGVDYLNQLEDHKDIVQYGLRNGTFFERYVQSTTREDFKHYLERAKIY 717
            ::|..||.||||..:....:.....|....|.....:|:...::.:....|..     ||:...|
Zfish   649 SSYTANLAAFLTVSRMDNTIRTFQDLARQMDFAYGTVRDSAVYDYFKAKGTNP-----LEQDSTY 708

  Fly   718 G----------------SAQEEDIEAVKRGERINIDWRINLQLIVQRHFEREKECHFALGRESFV 766
            .                |:..|.|...|:|....: |.:   .:|:.....:.:|...:...|..
Zfish   709 AELWRTISKNNGQDFSVSSPSEGIRKAKKGPYAFL-WDM---AVVEYAALTDDDCTITVSGNSMS 769

  Fly   767 DEQIAMIVPAQSAYLHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKS-AQRQVTNHKVNMDDM 830
            .:...:.:...|.|..|:::.|..:...|.::...|...|..|:|:..| :..|.....:.:...
Zfish   770 SKGYGIAMQHGSPYRDLISQKILELQEKGDLDVLKQKWWPRTGRCDLNSHSNAQPDGRSLKLHSF 834

  Fly   831 QGCFLVLLLGFTLALLIVCGEFWYRRFRASRKR 863
            .|.|.:|..|..||.|:...|.|:...|..:::
Zfish   835 AGVFCILAAGLLLACLVAALEMWWNSNRCRQEQ 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 56/274 (20%)
Lig_chan 576..836 CDD:306551 55/283 (19%)
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..424 CDD:107387 72/408 (18%)
ANF_receptor 36..400 CDD:279440 63/371 (17%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:304360 75/396 (19%)
Lig_chan 565..840 CDD:278489 55/283 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591117
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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