DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and grin2da

DIOPT Version :10

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_073787594.1 Gene:grin2da / 449864 ZFINID:ZDB-GENE-041008-124 Length:1918 Species:Danio rerio


Alignment Length:556 Identity:115/556 - (20%)
Similarity:217/556 - (39%) Gaps:138/556 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 RNFEFINIGYW-TPVLGFVC-------QELAF-----------------PHIE-----HHFRNIT 434
            |::.|.|.||. .|:|..:.       :|:.:                 |.::     .|.|.:|
Zfish   395 RDYSFNNDGYLANPLLDVISYTAGRGWEEVGWWENGVLRLRYPPWSRYGPFLKPLDDSQHLRVVT 459

  Fly   435 MD-----ILTVHNP----------PWQILTKNSNGVIVE------H--KGIVMEIVKELSRALNF 476
            ::     |:...:|          |.::...|.:.::||      |  ||..::::|.|::.:.|
Zfish   460 LEERPFVIVEPADPGTGSCIRDSVPCRLPLNNRSSMVVEGIQSMKHCCKGFCIDVLKRLAKIVGF 524

  Fly   477 SYYLHEASAWKEEDSLSTSAGG-------NESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATV 534
            :|.|:..:..:...::.....|       ..:|..:||:|.            |:.....|..:|
Zfish   525 TYDLYLVTNGRHGKNIDGQWNGMVGEVVSKRADMAIGSLTI------------NEERSEVVEFSV 577

  Fly   535 EDPDQKPFNYTQPISVQKYSFITRKPDEVSRIYLFTAPFTVETWFCLMGIIL-LTAPTLYAINRL 598
                  ||..| .|||    .::|....||. ..|..|::...|..:..:.| :.|.|::.....
Zfish   578 ------PFVET-GISV----MVSRSNGTVSP-SAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFF 630

  Fly   599 AP------LKEMRIVGLS--TVKSCFWYIFGALLQQGGMYL--PTADSGRLVVGFWWIVVIVLVT 653
            :|      |:..:..|.|  |:....|.:: ||:....:.:  |...:.:::|..|....::.:.
Zfish   631 SPVGYNRSLQSGKTAGGSKFTIGKSIWLLW-ALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLA 694

  Fly   654 TYCGNLVAFLTFPKFQPGVDYLNQLEDHK---DIVQY-GLRNGTFFERYVQSTTREDFKH---YL 711
            :|..||.||:...::   :|.::.|.|.|   ...|| .||.||......:...|.::.:   |:
Zfish   695 SYTANLAAFMIQEEY---IDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYM 756

  Fly   712 ERAKIYGSAQEEDIEAVKRGERINIDWRINLQLIVQRHFEREKECH-FALGR-ESFVDEQIAMIV 774
            .|....|  .|:.||.:|.|:   :|..|....::.....:::.|. ..:|. :.|......:.:
Zfish   757 VRNNQRG--VEDAIENLKTGK---LDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGVAL 816

  Fly   775 --------PAQSAYLHLVNRHIKSMFRMGFIER-WHQMNLPSAGKCNGKSAQRQVTNHKVNMDDM 830
                    |...|.|.||...     .:..:|| |      .:|.|:....  :|.:.|:::|:|
Zfish   817 HKNSRWKRPLDLALLQLVGDD-----EIDMLERLW------LSGICHNDKI--EVMSSKLDIDNM 868

  Fly   831 QGCFLVLLLGFTLALLIVCGE---FWYRRFRASRKR 863
            .|.|.:||:...|:||:...|   :|..|....|.|
Zfish   869 AGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCLGRTR 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:473866 66/312 (21%)
Lig_chan 574..836 CDD:459656 60/290 (21%)
grin2daXP_073787594.1 None

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