DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir93a and Ekar

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:778 Identity:151/778 - (19%)
Similarity:285/778 - (36%) Gaps:210/778 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 GDEFPQLILDAKVQQILNWKTAVVFVDQTILEENALLVKSIVHESITNH-----ITPISLILYEI 204
            |.|...:|:|.....|                  ::|:|:|:.:.:..:     .|...|..|::
  Fly   192 GKEIHNIIIDTNSNGI------------------SILLKNILQQQMNEYKYHYLFTSFDLETYDL 238

  Fly   205 ND---------SLR-GQQKRVALRQALSQFAPKKHEEMRQQFLVISAFHEDIIEIAETLNMFHVG 259
            .|         |.| .....|.::|.|.......|...::.:|.:......|:| :|...||.  
  Fly   239 EDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILE-SEPALMFD-- 300

  Fly   260 NQWMIFVLDMVARDFDAGTVTINLDEGANIAFALNETDPNCQDSLNCTISEISLALVNAISKITV 324
               .::|       |..|..|:....                          ||.|:|    |:.
  Fly   301 ---SVYV-------FAIGLQTLEQSH--------------------------SLTLLN----ISC 325

  Fly   325 EEE-------SIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGK 382
            |||       |:...::..||:.:....|.|..:.:::..:.:|.                    
  Fly   326 EEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKL-------------------- 370

  Fly   383 SQENRKFRSTPQRDAKNRNFEFINIGYWTP--VLGFVCQELAFPHIEHHFRNITMDILTVHNPPW 445
                             :....:.:|.|||  .|......:.|   :....|:|:.::|:...|:
  Fly   371 -----------------KQHSIVKVGEWTPHGHLNITEPSMFF---DAGSMNVTLVVITILETPY 415

  Fly   446 QILTKNSNGVIVEH-KGIVMEIVKELSRALNFSYYLH------------EASAWKEEDSLSTSAG 497
            .::....|....|. .|..::|::.:||.:.|.|.|.            |...|   :.:.....
  Fly   416 VMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEW---NGMVAQLM 477

  Fly   498 GNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPFNYTQPISVQKYSFITRKP-D 561
            ..::|..|||||  |.|....::                      ::|:|......|.:.:.| .
  Fly   478 KYKADLAVGSMT--ITYARESVI----------------------DFTKPFMNLGISILFKVPTS 518

  Fly   562 EVSRIYLFTAPFTVETWFCLMGIILLTAPTLYAINRLAP----------LKEMRIVGLSTVKSCF 616
            |.:|::.|..|..:|.|..::....|.:..:|.:.:|:|          |:.:.|....::...|
  Fly   519 EPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIEWKCINACDLENISIGNQFSLTDSF 583

  Fly   617 WYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDH 681
            |:..|..:||.....|.|.|.|::...|....:::|.:|..||.||||..:.      :|.:|:.
  Fly   584 WFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERM------INPIENA 642

  Fly   682 KDI-----VQYG-LRNG---TFFERYVQSTTREDFKHY-LERAKIYGSAQEEDIEAVKRGERINI 736
            :|:     :.|| |.:|   |||...|..|.::.::.. .::...:.:..|:.|:.|.:|....:
  Fly   643 EDLASQTEISYGTLDSGSTMTFFRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQGNYAFL 707

  Fly   737 DWRINLQLIVQRHFEREKECHFA-LGRESFVDEQ-IAMIVPAQSAYLHLVNRHIKSMFRMGFI-- 797
            .....|..||||      :|:.. :|  ..:|.: ..:..|..|.:...::..|..:...|.|  
  Fly   708 MESTMLDYIVQR------DCNLTQIG--GLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQM 764

  Fly   798 --ERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLIVCGEFWYRRFR 858
              ::|.: |....  |..|:..:|...:.:.::.:.|.|:||:.|..:|.::...|||| .||
  Fly   765 LYDKWWK-NTDET--CTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFEFWY-NFR 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 67/300 (22%)
Lig_chan 576..836 CDD:306551 62/285 (22%)
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 46/293 (16%)
ANF_receptor 39..371 CDD:279440 42/276 (15%)
PBP2_iGluR_Kainate 402..771 CDD:270432 87/409 (21%)
Lig_chan 533..807 CDD:278489 64/290 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462924
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.