DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and KaiR1D

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster


Alignment Length:965 Identity:194/965 - (20%)
Similarity:380/965 - (39%) Gaps:226/965 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MRPSACLLL-LAGLQLSILVPTEANDFSSFLSANASLAVVVDHEYMT-------VHGENILAHFE 62
            ||.|..|:| |..||| ||...:|......:..........||:.:.       ::.:..:....
  Fly     1 MRSSGVLVLPLLLLQL-ILNCRKAQSLPDIIKIGGLFHPADDHQELAFRQAVDRINADRSILPRS 64

  Fly    63 KILSDVIRENLRNGGINVKYFSWNAVR----LKKDFLAAITVTDCENTWNFYKNTQETSILLIAI 123
            |:::.:.|.:        .:.|::|.:    |....:|||          |...:..|:..:.:|
  Fly    65 KLVAQIERIS--------PFDSFHAGKRVCGLLNIGVAAI----------FGPQSSHTASHVQSI 111

  Fly   124 TDSDCPRLPLNRALMVPIVENGDEF--------------PQLILDAKVQQILN--WKTAVVFVDQ 172
            .|:          :.:|.:||..::              |..:..|.|..:.:  |||..:    
  Fly   112 CDN----------MEIPHLENRWDYRLRRESCLVNLYPHPNTLSKAYVDIVRHWGWKTFTI---- 162

  Fly   173 TILEENALLVKSIVHESITNH-ITPISLILYEINDSLRGQQKRVALRQALSQFAP--KKHEEMRQ 234
             |.|.|..:|:  :.|.:..| :||..:.:.:::||              ..:.|  |:.:...:
  Fly   163 -IYENNDGIVR--LQELLKAHGMTPFPITVRQLSDS--------------GDYRPLLKQIKNSAE 210

  Fly   235 QFLVISAFHEDIIEI---AETLNMFHVGNQWMIFVLDMVARDFDAGTVTINLDE----GANI-AF 291
            ..:|:....|.|.|:   |:.:.|....:.:::..||:         .|:||||    |.|| .|
  Fly   211 AHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDL---------HTVNLDEFRYGGTNITGF 266

  Fly   292 AL-NE---TDPNCQDSLNCTISEISLALVNAISKITVEEESIYGEISDEEWEAIRFTKQEKQAEI 352
            .| ||   :|...|.|::      ...|:.:.:..||..|:..      .::|:...  .|....
  Fly   267 RLINEKIVSDVVRQWSID------EKGLLRSANLTTVRSETAL------MYDAVHLF--AKALHD 317

  Fly   353 LEYMKEFLKTNAKCSSCARWRVE-TAITWGKSQENRKFRSTPQRDAKNRNFEFI----------- 405
            |:..::.......|...:.|:.. :.|.:.|..|.:...:..:.|.:....:|:           
  Fly   318 LDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGI 382

  Fly   406 -NIGYWTPVL----GFV------CQELAFPHIEHHFRNITMDILTVHNPPWQI-------LTKNS 452
             .||.|...|    .|.      .||     ||.:.:|.|:.:.|:.:.|:.:       |:.|.
  Fly   383 RKIGTWNSTLPDGINFTRTFSQKQQE-----IEANLKNKTLVVTTILSNPYCMRKESAIPLSGND 442

  Fly   453 NGVIVEHKGIVMEIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVV 517
                 :.:|..::::.|:|::|.|:|.:          .|.........::|.|.....|.    
  Fly   443 -----QFEGYAVDLIHEISKSLGFNYKI----------QLVPDGSYGSLNKLTGEWNGMIR---- 488

  Fly   518 EMV-QGNQFFIAAVAATVEDPDQKPFNYTQPISVQKYSFITRKP-DEVSRIYLFTAPFTVETWFC 580
            |:: |.....||.:..|.|  .::..::|.|......|.:.||| .:...::.|.:|.:::.|..
  Fly   489 ELLEQRADLAIADLTITFE--REQAVDFTTPFMNLGVSILYRKPIKQPPNLFSFLSPLSLDVWIY 551

  Fly   581 LMGIILLTAPTLYAINRLAPLK--------EMRIVGLSTVKSCFWYIFGALLQQGGMYLPTADSG 637
            :....|..:..|:.:.:..|.:        ..::....|:.:|.|:..|:|:|||..:||.|.|.
  Fly   552 MATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALST 616

  Fly   638 RLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDHKDI-----VQYG-LRNGT--- 693
            |:|.|.||...::::::|..||.||||..:..      :.:|..:|:     ::|| |:.|:   
  Fly   617 RMVAGIWWFFTLIMISSYTANLAAFLTVERMD------SPIESAEDLAKQTRIKYGALKGGSTAA 675

  Fly   694 FFERYVQSTTREDFKHYLERAK--IYGSAQEEDIEAVKRG--------ERINIDWRINLQLIVQR 748
            || |..:.:|.:....::|.|:  ::.::..|.:|.|.:|        |..:|:           
  Fly   676 FF-RDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSYAFLMESTSIE----------- 728

  Fly   749 HFEREKECHFALGRESFVDEQIAMIVPAQSAYLHLVNRHIKSMFRMGFIE----RWHQMNLPSAG 809
             :..|:.|...........:...:..|..|.|...:|..|..:...|.:.    :|.: .....|
  Fly   729 -YVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWK-EKRGGG 791

  Fly   810 KCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLI-VCGEFWYRRFRASRKR 863
            ||..::::.....:::.:.::.|.|:||:.|..:|.:| ||...|..|..|..:|
  Fly   792 KCRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRKVAVEER 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 66/293 (23%)
Lig_chan 576..836 CDD:306551 60/290 (21%)
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 76/437 (17%)
ANF_receptor 42..378 CDD:279440 71/407 (17%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 85/409 (21%)
Lig_chan 547..823 CDD:278489 62/295 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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