DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and GRIK4

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:922 Identity:176/922 - (19%)
Similarity:345/922 - (37%) Gaps:237/922 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EMRPSACLLLLAGLQLSILVPTEANDFSSFLSANASLAVVVDHEYMTVHGENILAHFEKILSDVI 69
            |...:.|.:|..|: :::|.|:.:...||.:|              .:.||..:.||:....:.:
Human    78 ETAETMCQILPKGV-VAVLGPSSSPASSSIIS--------------NICGEKEVPHFKVAPEEFV 127

  Fly    70 RENLRNGGINVKYFSWNAVRLKKDFLAAITVTDCENTWNFYKNTQETSILLIAITDSDCPRLPLN 134
            :...:      ::.:.|......|...|:.     ...||:..|  |:.|:.|  .::| .|.|.
Human   128 KFQFQ------RFTTLNLHPSNTDISVAVA-----GILNFFNCT--TACLICA--KAEC-LLNLE 176

  Fly   135 RALMVPIVENGDEFPQLILDAK-----VQQILNWKTAVVFVDQTILEENALLVKSIVHESITNHI 194
            :.|...::.......:::.|.:     :::|.:.|||.:.:.......:.:|:|:.....::.:.
Human   177 KLLRQFLISKDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYY 241

  Fly   195 TPISLILYEINDSLRGQQKRVALRQALSQFAPKKHEEMRQQFLVISAFHEDIIEIAETLNMFHVG 259
            |   .|...:..||:.....|..|..:..|:            :.:..|....|.|::||     
Human   242 T---YIFTNLEFSLQRMDSLVDDRVNILGFS------------IFNQSHAFFQEFAQSLN----- 286

  Fly   260 NQWMIFVLDMVARDFDAGTVTINLDEGANIAFALNETDPNCQDSLNCTISEISLALVNAISKITV 324
            ..|.                 .|.|   ::.|    |.|....:|   :.:...|:|.|:.::..
Human   287 QSWQ-----------------ENCD---HVPF----TGPALSSAL---LFDAVYAVVTAVQELNR 324

  Fly   325 EEESIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAI-TWGKSQE--- 385
            .:|.....:|                               |.|...|:..|:: .:.:..|   
Human   325 SQEIGVKPLS-------------------------------CGSAQIWQHGTSLMNYLRMVELEG 358

  Fly   386 ---NRKFRSTPQRD-------AKNRNFEFINIGYWTPVLGF-VCQELAFPHIEHHFRNITMDILT 439
               :.:|.|..||.       ...|| .|..||.|....|. :...|...:|.....|.|:.:.|
Human   359 LTGHIEFNSKGQRSNYALKILQFTRN-GFRQIGQWHVAEGLSMDSHLYASNISDTLFNTTLVVTT 422

  Fly   440 VHNPPWQILTKN-----SNGVIVEHKGIVMEIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGN 499
            :...|:.:|..|     .|.   .::|..::::|||:..|.|:|.:                   
Human   423 ILENPYLMLKGNHQEMEGND---RYEGFCVDMLKELAEILRFNYKI------------------- 465

  Fly   500 ESDELVGSMTFRIPY-------RVVEMVQGNQFFIAAVAATVEDPDQKPFNYTQP-----ISVQK 552
               .|||...:.:|.       .|.|:: ..:..:|....|:....:|..::::|     ||:..
Human   466 ---RLVGDGVYGVPEANGTWTGMVGELI-ARKADLAVAGLTITAEREKVIDFSKPFMTLGISILY 526

  Fly   553 YSFITRKPDEVSRIYLFTAPFTVETWFCLMGIILLTAPTLYAINRLAPLKEMR-----------I 606
            ...:.|||...|    |..||:...|..::...|..:..|:.:.||.|.:...           :
Human   527 RVHMGRKPGYFS----FLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLL 587

  Fly   607 VGLSTVKSCFWYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPG 671
            |...::.:..|:..|..:|||....|.|.|.|.|.|.||...::::::|..||.||||..:....
Human   588 VNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVP 652

  Fly   672 VDYLNQLEDHKDIVQYGLRNG----TFFERYVQSTTREDFKH-YLERAKIYGSAQEEDIEAVKRG 731
            ::.::.|.| :..::||..:|    |||:.....|.:..:.: |.::..::..:.||.|..|   
Human   653 IESVDDLAD-QTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARV--- 713

  Fly   732 ERINIDWRINLQLIVQRHFEREKECH------------FALGR---ESFVDE-QIAMIVPAQSAY 780
              :|.::...|:..:..:: |::.|:            :.:|.   ..|.|| .:|::...::..
Human   714 --LNSNYAFLLESTMNEYY-RQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNR 775

  Fly   781 LHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLAL 845
            |.::.|            :|.:     .|||..:...|.   ..:.|:::.|.|:||:.|..:|:
Human   776 LEILKR------------KWWE-----GGKCPKEEDHRA---KGLGMENIGGIFVVLICGLIVAI 820

  Fly   846 LIVCGEF-WYRR 856
            .:...|| |..|
Human   821 FMAMLEFLWTLR 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 68/299 (23%)
Lig_chan 576..836 CDD:306551 60/291 (21%)
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 73/431 (17%)
ANF_receptor 43..382 CDD:279440 66/412 (16%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 86/418 (21%)
Lig_chan 547..816 CDD:278489 62/295 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155766
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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