Sequence 1: | NP_650924.3 | Gene: | Ir93a / 42471 | FlyBaseID: | FBgn0259215 | Length: | 868 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036705.3 | Gene: | Grin2a / 24409 | RGDID: | 2737 | Length: | 1464 | Species: | Rattus norvegicus |
Alignment Length: | 819 | Identity: | 155/819 - (18%) |
---|---|---|---|
Similarity: | 313/819 - (38%) | Gaps: | 178/819 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 136 ALMVPIVENGDEFPQLILDAKVQQILNWK--TAVVFVDQTILEENALLVKSIVHE------SITN 192
Fly 193 HITP-----ISLILYEINDSLRG--QQKRVAL----RQALSQFAPKK-HEEMRQQFLVISAFHED 245
Fly 246 IIEIAETLNMFHVGNQ--WMIFVL-----DMVARDFDAGTVTINLDEGANIAFALNETDPNCQDS 303
Fly 304 LNCTISEISLALVNAISKITVEEESIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSS 368
Fly 369 CARWRVETAITW-GK----SQENRKFRSTPQRDAKNRNFEFINIGYWTPVLGFVCQELAFPHI-- 426
Fly 427 ------------EHHFRNITM-----------DILT---VHNP-PWQILTKNSN----GVIVEH- 459
Fly 460 -KGIVMEIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGN 523
Fly 524 QFFIAAVAATVEDPDQKPFNYTQP-----ISVQKYSFITRKPDEVSRIYLFTAPFTVETWFCLMG 583
Fly 584 IILL-TAPTLYAINRLAPLKEMRIVGLS--------TVKSCFWYIFGALLQQG-GMYLPTADSGR 638
Fly 639 LVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDHK-----DIVQYG--LRNGTFFE 696
Fly 697 RYVQSTTREDFKH---YLERAKIYGSAQEEDIEAVKRGERINIDWRINLQLIVQRHFEREKECHF 758
Fly 759 ALGRESFVDEQIAMIVPAQ--SAYLHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVT 821
Fly 822 NHKVNMDDMQGCFLVLLLGFTLALLIVCGE---FWYRRF 857 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir93a | NP_650924.3 | Periplasmic_Binding_Protein_Type_2 | 429..>697 | CDD:328725 | 66/310 (21%) |
Lig_chan | 576..836 | CDD:306551 | 50/281 (18%) | ||
Grin2a | NP_036705.3 | PBP1_iGluR_NMDA_NR2 | 32..392 | CDD:107373 | 59/325 (18%) |
PBP2_iGluR_NMDA_Nr2 | 403..802 | CDD:270436 | 84/433 (19%) | ||
HisJ | <458..>541 | CDD:223904 | 21/103 (20%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5JTY | 511..513 | 0/1 (0%) | |||
Lig_chan | 556..828 | CDD:278489 | 51/286 (18%) | ||
Pore-forming. /evidence=ECO:0000250|UniProtKB:B7ZSK1 | 599..620 | 3/20 (15%) |