DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and glr-8

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:471 Identity:109/471 - (23%)
Similarity:184/471 - (39%) Gaps:81/471 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 EHHF-------RNITMDILTVHNPPWQILTKNSNGVIVEH---KGIVMEIVKELSRALNFSYYLH 481
            |.||       |.:.| ::....||:......|:..:.:.   .|:||||:||:.:.||.:|.:.
 Worm    51 EKHFSLSEMKGRTLKM-VVPAIEPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLNLTYEIL 114

  Fly   482 EA--SAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPFNY 544
            .|  |.|.|              .|.||.|....    ::|:|....:|. .|.:|.......:.
 Worm   115 PALGSTWGE--------------YLNGSWTGAFG----QLVRGEVDLLAG-GAIMEYDRSVIADL 160

  Fly   545 TQPISVQKYSFITRKPD--EVSRIYLFTAPFTVETWFCLMGIILLTAPTLYAINRL--APLKEMR 605
            |.|...:....:.|.|:  |...:.:.|.||:.|.|.....:||::......:..:  ...:||.
 Worm   161 TYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVYEEMT 225

  Fly   606 IVGLSTVKSCFWYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPK--- 667
            :....::    |..|...:|||....|.:.|.|::|..||:..|.|..|:.|:|||.....|   
 Worm   226 VTPFESI----WVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNV 286

  Fly   668 -FQPGVDYLNQLEDHKDIVQYGLRNGTF-FERYVQSTTREDFKHYLERAK--IYGSAQEEDI--- 725
             || .:|.|.:|          ::.|.| ......|.||.:.   :.|:|  :|.....|.|   
 Worm   287 PFQ-NIDQLVRL----------VKQGKFEIVMDENSFTRTEM---IARSKLPVYRDLWHEMIVNH 337

  Fly   726 -----EAVKRG---ERINIDWRINLQLIVQRHFEREKECHFALGRESFVDEQIAMIVPAQSAYLH 782
                 ..:.||   .|.|..:.: |..:...:|....:|...|..:..:...:::.:...|.|..
 Worm   338 KVKYVNGIARGVAFVRANPGYAL-LGPMATLNFYAYSDCKVILFNDGILPVYLSIPLVKNSIYSP 401

  Fly   783 LVNRHIKSMFRMGFIERW-----HQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFT 842
            ..:..|:.|...||.::|     ..:.:....:||..:..   ....:::...||.|.|.|.|..
 Worm   402 YFSTKIREMVERGFTQKWIADYRSYVAMQKINECNSTTIG---PKSYLDLKRAQGAFWVFLGGAG 463

  Fly   843 LALLIVCGEFWYRRFR 858
            |.|.:..|||.::.||
 Worm   464 LGLALFVGEFIFKFFR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 70/288 (24%)
Lig_chan 576..836 CDD:306551 60/284 (21%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 91/400 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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