DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and glr-7

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:864 Identity:165/864 - (19%)
Similarity:338/864 - (39%) Gaps:185/864 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 DSDCPRLPLNRALMVPIVENGDEFPQLILDAKVQQI------LN-WK-------TAVVFVDQ--- 172
            :|.|.:: :|.:.::.:..:.|....:...|::.|:      || |.       |:|..:..   
 Worm    26 NSLCDQM-VNVSFVISVCRSNDSISLVAELARISQVPTIQVDLNYWSLPLNFNGTSVPTISSPSY 89

  Fly   173 TILEENALLVKSIVHESITN-HITPISLILYEINDSLRGQQKRVALRQALS-----QFAPKKHEE 231
            |.:..:.|:.::::.:...: :|||.|.:||   |::. .....|.|.|.|     :|.|.:...
 Worm    90 TTMVLSTLVFQNVITDIFADLNITPNSTVLY---DNMY-PPDFTAWRDAFSVLPGIRFVPMETTV 150

  Fly   232 MRQQFLVIS---AFHEDIIEIAETLNMFHVGNQWMIFVLDMV-ARDFDAGTVTINLDEGANIAFA 292
            :|.:..:..   |....:|.:|:|.|:    .::.:...|.: .|.|:...:|.::     .||.
 Worm   151 LRMRAQITQLRMASINSLILVAKTENV----ERFTLEAADFIEQRVFNTYVLTKDI-----TAFK 206

  Fly   293 LNETDPNCQDSLNCTI--------------------SEISLAL---VNAISKITVEEESIYGEIS 334
            .:    :|:.:....:                    :||.|.|   :|....:.|   :.|..:.
 Worm   207 CD----SCESAFMFWLRPFPVGKLMEIRDLDDYLFRNEIGLELDYSINGWDSLNV---AFYMNVM 264

  Fly   335 DEEWEAIR-----------FTKQEKQAE--ILEYMKEFLKTNAKCSSCARWRVETAITWGKSQEN 386
            ...:|.||           ||.|...:|  |...:::.: .|........:.......:.:..|.
 Worm   265 GYAFETIRTMNATFDVLPTFTCQTGPSEPNITTTVRDII-LNDPAHEYGNYTEAGLNMFFQDVEV 328

  Fly   387 RKFRSTPQRDAKNRNFEFINIGYWTPVLGFVCQELAFPHIEHHFRNITM-DILTVHNPPWQILTK 450
            |.::....||.::..|. ..:|.|:|:...   .:.:..::...||:.: .::|:..||:...|.
 Worm   329 RIYKIDRDRDHEDALFN-KEVGVWSPISKL---SVMYGTLQVDVRNLNIFRVVTLIQPPFVQRTG 389

  Fly   451 NSNGVIVEHKGIVMEIVKELSRALNFSYYLHEASAWKEEDSLSTSAGGNESDELVGSMTFRIPYR 515
            :.:   ..::|..::::..:...:||:|.::|.    |:.|..|.......:.|:|:        
 Worm   390 DPD---TPYEGYCIDLINMIQVEVNFTYTIYEV----EDGSFGTMDDNGNWNGLIGA-------- 439

  Fly   516 VVEMVQGNQFFIAAVAATVEDPDQKPFNYTQP-ISVQKYSFITRKPDEVSRIYLFTAPFTVETWF 579
               :|.|:. .||....:|....:...::|.| ..:...:.:.:|.|....::.|........|.
 Worm   440 ---LVSGSA-DIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWPVWL 500

  Fly   580 CLMGIILLTAPTLYAINRLAPLK------------EMRIVGLSTVKSCFWYIFGALLQQGGMYLP 632
            |::...|.|:..|:..:|.:|..            |.|...|   |.|.|:...:|..|||...|
 Worm   501 CIVAAYLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSL---KECLWFCMTSLTPQGGGEAP 562

  Fly   633 TADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQL-EDHKDIVQY----GLRNG 692
            ...|||||...||:...:::.:|..||.||||..:.:..:..|:.| :.:|  ::|    |..:.
 Worm   563 KNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDLAKQYK--IEYAPIKGSASE 625

  Fly   693 TFFERYVQSTTREDFKHYLERAKIYGSAQEED-----IEAVKRGERINIDWR--------INLQL 744
            |:|.|..:  ..|.|.:..:...:..|....|     :......::....||        :|:..
 Worm   626 TYFRRMAE--IEETFYNMWKEMSLNESMSPRDRAKLAVWDYPVSDKFTNMWRYMQESKLPVNMDT 688

  Fly   745 IVQR-----------------HFEREKECHFALGRESFVDEQIAMIVPA--------QSAYLHLV 784
            .|.|                 .:.....|:.......|..:..|:.|.:        .||.|.|:
 Worm   689 AVDRVLNSVDGFAFIGDATEIKYAALTNCNLQQVGTEFSRKPYAIAVQSGHILKDKISSAILMLL 753

  Fly   785 N-RHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLIV 848
            | |.::::     .|:|...| |:...|...|.:    :..:::.::.|.|:|:|.|..|:::.:
 Worm   754 NERRLETL-----KEKWWTDN-PNKVSCPDSSDE----SDGISIQNIGGVFIVILAGIALSIVTL 808

  Fly   849 CGEFWY--RRFRASRKRRQ 865
            ..|::|  |:.|.:.::.|
 Worm   809 AFEYYYYKRKARKAAEKEQ 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 65/286 (23%)
Lig_chan 576..836 CDD:306551 67/315 (21%)
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556 26/134 (19%)
PBP2_iGluR_putative 373..767 CDD:270435 85/424 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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