DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir93a and glr-2

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001021114.1 Gene:glr-2 / 175999 WormBaseID:WBGene00001613 Length:977 Species:Caenorhabditis elegans


Alignment Length:959 Identity:174/959 - (18%)
Similarity:336/959 - (35%) Gaps:282/959 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 WNAVR-----LKKDFLAAITVTDCENTWNFYKNTQETSILLIAITDSDCPRLPL----------- 133
            ||..|     :|..::..:..|:.:| :..|::.            ::..::||           
 Worm    80 WNLNRIICDEMKLGYMLMLAGTNFKN-YGIYEDI------------ANHMKMPLIDWEPSKSENI 131

  Fly   134 -----NRALMVPIVENGDEFPQLILDAKVQQILNWKTAVVFVDQTILEENALLVKSIVHES---- 189
                 |..::..:..:.:   ||::|  ..|...|:..|...|....:.....:.|.:||.    
 Worm   132 GKTTENNPMIFSVAPSAE---QLLID--YIQYKGWRDVVYIHDGKNADRTLRTMFSYLHEKSPKY 191

  Fly   190 ---ITNHITPISLILY-----------------EINDS---------------LRGQQKRVALRQ 219
               :.|::.|....::                 :.|||               |.|..:..|..:
 Worm   192 QLFVDNYVAPSDEEMFKEFLNEFHRRISTQHTLKSNDSSEEIDEPIPVNVIVDLEGSYRTRAFLR 256

  Fly   220 AL--SQFAPKKHEEMRQQFLV----ISAFHEDIIEI-----------------AETLNMFHVGNQ 261
            ||  |....|::..:...|.|    :|.||..:|.|                 ||..:::..|..
 Worm   257 ALEESVLVKKEYHYVFSNFDVDETDLSGFHFSLINITIFRIFDKNNKKFLKTRAEFHDVYRGGFS 321

  Fly   262 WMIFVLDMVARDFDAGTVTINLDEGANIAFALNETDPNCQDSLNCTISEISLALVNAISKITVEE 326
            ....:....|...||..|.     |..:..|:||......|.     |.:...|.|...|     
 Worm   322 NTDSIPTAAAFAHDAILVA-----GKALQIAMNEHGKGIFDK-----SFVRHQLFNRGRK----- 371

  Fly   327 ESIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGKSQENRKFRS 391
             .:|....:::.|:.:|...|...:|.|.:|:.:.|:.          :..:| |:.|.::.   
 Worm   372 -GLYCRPHEDQTESRQFETFEHGKKIAEAIKKVVLTDK----------DGTLT-GRIQFDKV--- 421

  Fly   392 TPQRDAKNRNF--EFINIG-------------YWTPVLGFVCQELAFPHIEHHFRNITMD----- 436
                ..|..||  |.:.|.             .|....||:...      |.:.:....|     
 Worm   422 ----TGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGFLLGG------ERYVQEKKKDSSQTR 476

  Fly   437 --ILTVHNPPWQ-------------ILTKNSNGVIVEHK------GIVMEIVKELSRAL-NFSY- 478
              ||.  :.|||             ::.|..|....|.|      |..::::..|::.: .|.| 
 Worm   477 KGILP--SKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKNITGFEYD 539

  Fly   479 -YLHEASAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPF 542
             ::.:.:.:          |..::|   ||....|.|.:.|...     :|....|:....::..
 Worm   540 VFISDGNKY----------GSRQAD---GSWDGMIGYLLNETAD-----VAVAPLTITQERERAV 586

  Fly   543 NYTQPISVQKYSFITRKPDEVS-RIYLFTAPFTVETWFCLMGIILLTAPTLYAINRLAPLK---- 602
            ::::|......|.:.:||::.. .|:.|..|..:..|...:......:.|::.::..:|.:    
 Worm   587 DFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIE 651

  Fly   603 ----EMRIVGLSTVKSCFWYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFL 663
                |..:....|:.:..|:...|.:|||...||.|.|||:....||...:::|::|..||.|||
 Worm   652 FKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFL 716

  Fly   664 TFPKFQPGVDYLNQLEDHKDIVQYGLRNG----TFFE-----------RYVQSTTREDFKHYLER 713
            |..:..|.::.:..|.:...|: ||:..|    .|||           .::.|||::..:  ||:
 Worm   717 TLERMTPPIESVEDLANQNKIL-YGVNEGGSTAAFFEDSIVPLYKKMWNFMVSTTQKQIE--LEK 778

  Fly   714 A--------KIYGSAQEEDIEAVK--RGERINIDWRINLQLIVQRHFEREKECH----------- 757
            .        :|:.|:..:.||.|:  :|:     :...|:.....:....:.|.           
 Worm   779 QSITNSTSNRIFVSSYADGIEKVRTSKGK-----YAFLLEETTNNYESGRRPCDTMKVGQNLNTL 838

  Fly   758 -----FALGRESFVDEQIAMIVPAQSAYL-HLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKSA 816
                 ..:|....|...:|::..::...| .|.|:.            |:.......|..:|.  
 Worm   839 GYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKW------------WYDRGQCDTGTSDGG-- 889

  Fly   817 QRQVTNHKVNMDDMQGCFLVLLLGFTLALLIVCGEFWYRRFRASRKRRQ 865
                |:..:|:..:.|.|.:||.|..|::.....||.:|:.:.:|::.:
 Worm   890 ----TSSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFRKNKENREKER 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 65/320 (20%)
Lig_chan 576..836 CDD:306551 61/309 (20%)
glr-2NP_001021114.1 Periplasmic_Binding_Protein_Type_1 7..453 CDD:299141 72/424 (17%)
Periplasmic_Binding_Protein_Type_2 491..875 CDD:304360 78/421 (19%)
Lig_chan 621..910 CDD:278489 63/314 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.