DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and LOC110438919

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:790 Identity:142/790 - (17%)
Similarity:301/790 - (38%) Gaps:202/790 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 ILEENALLVKSIVHESITNHITPISLILYEINDSLRGQQKRVALRQALS--------QFAPKKHE 230
            |:||....:.|||......:...::.|...|.:|..|.:....|...:|        |...||  
Zfish    19 IMEEYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDAKIQNLLKK-- 81

  Fly   231 EMRQQFLVISAFHED---IIEIAETLNMFHVGNQWMIFVL-----DMVARDFDAGTVTINLDE-- 285
             ::...:::.:..|:   |.::|.::.:...|..|::..|     |.:..:|..|.::::.||  
Zfish    82 -LQSPVILLYSTKEEANIIFQVAHSVGLTGYGYTWIVPSLVAGDADHIPAEFPTGMISVSYDEWD 145

  Fly   286 ---------GANIAFALNET-----------------DPNCQDSLNCTISEISLALVNAISKITV 324
                     |..:......|                 .|:.:..:....:|:...|:|    :|.
Zfish   146 YGLEARVRDGVAVIATATSTMMMDRGPHTLLKSECHGAPDKKSPMTGNNNEVLRYLMN----VTF 206

  Fly   325 EEESIYGEISDEEWE-----AIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGKSQ 384
            |..::  ..|::.::     .|....:|:|                      |  :....|....
Zfish   207 EGRNL--SFSEDGYQMHPKLVIILLDKERQ----------------------W--DRVGKWENGS 245

  Fly   385 ENRKFRSTPQRDAKNRNFEFINIGYWTPVLGFVCQELAFPHIEHHFRNITMDILTVHNPPWQIL- 448
            .:.|:...|:       ||..:        |...:|      :.|     :.|:|:...|:.|: 
Zfish   246 LSMKYHVWPR-------FELYS--------GPEARE------DDH-----LSIVTLEEAPFVIVE 284

  Fly   449 -------------------------TKNSNGVIVEH--KGIVMEIVKELSRALNFSYYLHEASAW 486
                                     |::| .|.::.  ||..::|:|::::.:.|:|.|:..:..
Zfish   285 DVDPLSGTCMRNTVPCRKQLKALNQTQDS-AVYIKRCCKGFCIDILKKIAKNVKFTYDLYLVTNG 348

  Fly   487 KEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPFNYTQP---- 547
            |....::.:..|     :||.:..:..:            :|..:.|:.:...:..:::.|    
Zfish   349 KHGKKINGTWNG-----MVGEVVLKNAH------------MAVGSLTINEERSEVIDFSVPFIET 396

  Fly   548 -ISVQKYSFITRKPDEVSRIYLFTAPFTVETWFCLMGIILL-TAPTLYAINRLAPLKEMRIV--- 607
             |||    .::|....||. ..|..||:.:.|..:..::|| :|..::.....:|:...|.:   
Zfish   397 GISV----MVSRSNGTVSP-SAFLEPFSADVWIMMFVMLLLVSAIAVFIFEYFSPVGYNRCLADG 456

  Fly   608 ----GLS-TVKSCFWYIFGALLQQG-GMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFP 666
                |.| |:....|.::|.:.... .:..|...:.:::|..|....::.:.:|..||.||:...
Zfish   457 REAGGPSFTIGKAIWLLWGLVFNNSVPVQNPRGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQE 521

  Fly   667 KFQPGVDYLNQLEDHK-----DI---VQYG-LRNGTFFERYVQSTTREDFKHYLERAKIYGSAQE 722
            ::   ||.::.|.|.|     |.   .::| :.||: .||.:::..| |...|:  .|.:.....
Zfish   522 EY---VDQVSGLSDKKFQNPNDFSPPFRFGTVPNGS-TERNIRNNYR-DMHSYM--VKFHQRNVV 579

  Fly   723 EDIEAVKRGERINIDWRINLQLIVQRHFEREKECHF-ALGR-ESFVDEQIAMIVPAQSAYLHLVN 785
            |.:|::|.|:   :|..|....::.....|::.|.. .:|. :.|......:.:...|.:...|:
Zfish   580 EALESLKTGK---LDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 641

  Fly   786 RHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLIVCG 850
            ..|..:|..|.:|....:.|  .|.|:.:  :.:|.:.::::|:|.|.|.:|.....|:|:....
Zfish   642 LAILQLFGDGEMEELEALWL--TGICHHE--KNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIA 702

  Fly   851 E---FWYRRF 857
            |   :|:.||
Zfish   703 EHVFYWHMRF 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 59/319 (18%)
Lig_chan 576..836 CDD:306551 58/280 (21%)
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 41/268 (15%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 84/439 (19%)
DUF4013 <389..478 CDD:315788 21/93 (23%)
NMDAR2_C 704..1417 CDD:313729 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591350
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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