DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and grik1

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_004912220.1 Gene:grik1 / 100493949 XenbaseID:XB-GENE-957124 Length:928 Species:Xenopus tropicalis


Alignment Length:999 Identity:193/999 - (19%)
Similarity:363/999 - (36%) Gaps:274/999 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GEMRPSACLLLLAGLQLSILVPTEANDFSSFLSANASLAVVVDHEYMTVHGENILAHFEKILSDV 68
            |:.|.:...:|.......:|:|        ||.|.|::......:.:.:.|              
 Frog     7 GDRRSNNLSVLRMESAARLLLP--------FLCALAAITPQASQQVLRIGG-------------- 49

  Fly    69 IRENLRNGGINVKYFSWNAVRLKKDFLAAITVTDCENTWNFYKNTQET-SILLIAITDS------ 126
            |.|.:.|..|||:..::.           ..||:.........||..| .|..|.:.||      
 Frog    50 IFETVENEPINVEELAFK-----------FAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRR 103

  Fly   127 DCPRLPLNRALMV-----------------------------PIVENGDEF-----PQ--LILDA 155
            .|.:|.|..|.:.                             |.|:|.|.|     |.  .|..|
 Frog   104 ACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDSFFINLHPDYAAISRA 168

  Fly   156 KVQQIL--NWKT-AVVFVDQTILEENALLVKSIVHESITNHITPISLILYEINDSLRGQQKRVAL 217
            .::.:|  :||| .||:.|.|.|.....|:|:....:|                       ::.:
 Frog   169 VLELVLHYSWKTVTVVYEDSTGLIRLQELIKAPSRYNI-----------------------KIKI 210

  Fly   218 RQALS-----QFAPKKHEEMRQQFLVISAFHEDIIEIAE---TLNMFHVGNQWMIFVLDMVARDF 274
            ||..|     :...|:.::.|:.:::....||...||.:   ::.|......:....:|:.|.|.
 Frog   211 RQLPSGNKDARTLLKEMKKSREFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTMDLFALDL 275

  Fly   275 DAGTVTINLDEGANI-AFALNETDPNCQDSLNCTISEISLALVNAISK---------ITVEEESI 329
            :....:     |.|: .|.|...|   ...::..:.:.|:..:.|..|         :|.:...:
 Frog   276 EPYRYS-----GVNMTGFRLLNID---NPQVSSVVEKWSMERLQAPPKPETGLLDGMMTTDAALM 332

  Fly   330 YGE---ISDEEWEAIRFTKQEKQA----------EILEYMKEFLKTNAKCSSCARWRVETA-ITW 380
            |..   ::.....|.:.|....|.          ..:..:||           |||...|. ||:
 Frog   333 YDAVYMVAVATQRATQMTVSSLQCHRHKPWRFGPRFMSLIKE-----------ARWDGLTGRITF 386

  Fly   381 GKSQENRK--------FRSTPQRDAKNRNFEFIN-----IGYWTPVLGF-VCQEL--AFPHIEHH 429
            .::...|:        .:......|.......:|     :|.|....|. :...|  ...:|...
 Frog   387 NRTDGLRRDFDMDIISLKEDGMEKAAGETVNHLNKVWKKVGVWNSNTGLNMTDNLKDKSTNITDS 451

  Fly   430 FRNITMDILTVHNPPWQILTKNSNGVIVEHK--GIVMEIVKELSRALNFSYYLHEASAWKEEDSL 492
            ..|.|:.:.|:...|:.:..|:...:....:  |..::::||||..|.|:|.:......|     
 Frog   452 LANRTLIVTTILEDPYVMFRKSDKPLYGNDRFEGYCLDLLKELSNILGFTYEVRLVVDGK----- 511

  Fly   493 STSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPFNYTQPISVQKYSFIT 557
              ....|:..|..|.:...|.::.         .:|....|:....:|..::::|......|.:.
 Frog   512 --YGAQNDKGEWNGMVRELIDHKA---------DLAVAPLTITYVREKVIDFSKPFMTLGISILY 565

  Fly   558 RKPDEVS-RIYLFTAPFTVETWFCLMGIILLTAPTLYAINRLAPLK---------EMRIVGLS-T 611
            |||:..: .::.|..|.:.:.|..::...|..:..|:.|.|..|.:         :..:|..: |
 Frog   566 RKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFT 630

  Fly   612 VKSCFWYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLN 676
            :.:.||:..|||:|||...:|.|.|.|:|.|.||...::::::|..||.||||..:.:..:|..:
 Frog   631 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSAD 695

  Fly   677 QLEDHKDIVQYG-LRNG---TFFERYVQSTTREDFKHYLERAKIYGSAQEE------DIEAVKRG 731
            .|.....| :|| :|:|   |||::...||        .|:...:.|::::      :.|.::| 
 Frog   696 DLAKQTKI-EYGAVRDGSTMTFFKKSKIST--------YEKMWAFMSSRQQTALVKNNDEGIQR- 750

  Fly   732 ERINIDWRI-----NLQLIVQRHFEREKECHFA-LGRESFVDEQ-----------------IAMI 773
             .:..|:.:     :::.:.||:      |:.. :|  ..:|.:                 ||::
 Frog   751 -VLTTDYALLMESTSIEYVTQRN------CNLTQIG--GLIDSKGYGVGTPIGSPYRDKITIAIL 806

  Fly   774 VPAQSAYLHLVNRHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLL 838
            ...:...||::.            |:|        .:.||...:.......:.::::.|.|:||.
 Frog   807 QLQEEGKLHMMK------------EKW--------WRGNGCPEEDSKEASALGVENIGGIFIVLA 851

  Fly   839 LGFTLALLIVCGEFWYRRFRASRK 862
            .|..|::.:..|||.|:    |||
 Frog   852 AGLVLSVFVAIGEFIYK----SRK 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 69/284 (24%)
Lig_chan 576..836 CDD:306551 63/302 (21%)
grik1XP_004912220.1 Periplasmic_Binding_Protein_Type_1 43..438 CDD:299141 80/461 (17%)
ANF_receptor 61..404 CDD:279440 69/395 (17%)
Periplasmic_Binding_Protein_Type_2 454..823 CDD:304360 87/423 (21%)
Lig_chan 585..854 CDD:278489 65/307 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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