DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir93a and LOC100149482

DIOPT Version :9

Sequence 1:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:556 Identity:112/556 - (20%)
Similarity:213/556 - (38%) Gaps:144/556 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 RNFEFINIGY----------WTPVLGFVCQELAF----------------------PHIEHHFRN 432
            |::.|.|.||          :||..|:  :::.:                      |....|.| 
Zfish   375 RDYSFSNEGYLANPFLDVISYTPGSGW--EDVGWWENGVLRLRYPAWSRYGPFLQPPDDAQHLR- 436

  Fly   433 ITMDILTVHNPPWQI--LTKNSNGVIVEH------------------------KGIVMEIVKELS 471
                ::|:...|:.|  |...::|..:..                        ||..::|:|.|:
Zfish   437 ----VVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASALQEGVAPVKQCCKGFCIDILKRLA 497

  Fly   472 RALNFSYYLHEASAWKEEDSLSTSAGGNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVED 536
            |.:.|:|.|:..:..|.         |.:.|.:...|...:.|:..:|..|        :.|:.:
Zfish   498 RIVGFTYDLYLVTNGKH---------GKKIDGVWNGMVGEVVYKRADMAIG--------SLTINE 545

  Fly   537 PDQKPFNYTQP-----ISVQKYSFITRKPDEVSRIYLFTAPFTVETWFCLMGIILLT--APTLYA 594
            ...:..:::.|     |||    .::|....||. ..|..|::...| .:|.::.||  |.|::.
Zfish   546 ERSEVVDFSVPFVETGISV----MVSRSNGTVSP-SAFLEPYSPAVW-VMMFVMCLTVVAVTVFI 604

  Fly   595 INRLAP------LKEMRIVGLS--TVKSCFWYIFGALLQQGGMYL--PTADSGRLVVGFWWIVVI 649
            ....:|      |:..:..|.|  |:....|.:: ||:....:.:  |...:.:::|..|....:
Zfish   605 FEFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLW-ALVFNNSVPVENPKGTTSKIMVLVWAFFAV 668

  Fly   650 VLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDHK---DIVQY-GLRNGTFFERYVQSTTREDFKHY 710
            :.:.:|..||.||:...::   :|.::.|.|.|   ...|| .|:.||......:...|.::...
Zfish   669 IFLASYTANLAAFMIQEEY---IDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEKNIRSNYPDM 730

  Fly   711 LERAKIYGSAQEED-IEAVKRGERINIDWRINLQLIVQRHFEREKECH-FALGRE---SFVDEQI 770
            .:....|.....|| |..:|.|:   :|..|....::.....:::.|. ..:|..   :.....|
Zfish   731 HQYMVKYNQKSVEDAISHLKTGK---LDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGI 792

  Fly   771 AMIV------PAQSAYLHLV-NRHIKSMFRMGFIERWHQMNLPSAGKCNGKSAQRQVTNHKVNMD 828
            |:|.      |...|.|.|| :..|:.:.|:     |      .:|.|:....  :|.:.|:::|
Zfish   793 ALIKNSRWKRPLDLALLQLVGDDEIEMLERL-----W------LSGICHNDKI--EVMSSKLDID 844

  Fly   829 DMQGCFLVLLLGFTLALLIVCGE---FWYRRFRASR 861
            :|.|.|.:||:...|:||:...|   :|..|...|:
Zfish   845 NMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMSK 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 64/314 (20%)
Lig_chan 576..836 CDD:306551 61/287 (21%)
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373 8/47 (17%)
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 88/443 (20%)
HisJ <487..>570 CDD:223904 21/103 (20%)
Lig_chan 585..857 CDD:278489 63/292 (22%)
NMDAR2_C 868..>900 CDD:287527 3/13 (23%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591368
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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