DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15696 and NANOG

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_079141.2 Gene:NANOG / 79923 HGNCID:20857 Length:305 Species:Homo sapiens


Alignment Length:171 Identity:43/171 - (25%)
Similarity:69/171 - (40%) Gaps:37/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PFHPYAHPASYVS--KESGGSPPASAAEAQIPVYDWLQYTRYHPP------KLPRA---LRQNAP 88
            |..|.:.|....|  |||...|.....|...|.   ||.:....|      .||.:   |.|::|
Human     5 PACPQSLPCFEASDCKESSPMPVICGPEENYPS---LQMSSAEMPHTETVSPLPSSMDLLIQDSP 66

  Fly    89 AKRT--PGRLP------------RIP---------FTPQQLQALENAYKESNYLSAEDANKLADS 130
            ...|  .|:.|            ::|         |:..||..|.:.::...|||.:...:|::.
Human    67 DSSTSPKGKQPTSAEKSVAKKEDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNI 131

  Fly   131 LELTNTRVKIWFQNRRARERREKREKDESCDSTFSSNASSP 171
            |.|:..:||.||||:|.:.:|.::.......:..:..||:|
Human   132 LNLSYKQVKTWFQNQRMKSKRWQKNNWPKNSNGVTQKASAP 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 16/69 (23%)
NANOGNP_079141.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 22/93 (24%)
COG5576 74..191 CDD:227863 24/99 (24%)
Homeodomain 97..152 CDD:459649 17/54 (31%)
Required for DNA-binding. /evidence=ECO:0000269|PubMed:25825768 122..151 10/28 (36%)
8 X repeats starting with a Trp in each unit 196..240
Sufficient for transactivation activity. /evidence=ECO:0000250 196..240
Sufficient for strong transactivation activity. /evidence=ECO:0000250 241..305
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.