DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and nanog

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001091862.1 Gene:nanog / 792333 ZFINID:ZDB-GENE-030131-5486 Length:384 Species:Danio rerio


Alignment Length:102 Identity:33/102 - (32%)
Similarity:45/102 - (44%) Gaps:24/102 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLPRIPFTPQQLQALENAYKESNY 118
            ||..|..|. ||         .||.|||.              .|..|:.:|:.||.|.:....|
Zfish   179 PPLPALTAS-PV---------RPPTLPRK--------------TRAAFSEEQMNALVNRFNVQRY 219

  Fly   119 LSAEDANKLADSLELTNTRVKIWFQNRRARERREKRE 155
            |:..:...||.:..||..:||.||||||.:.:|.:|:
Zfish   220 LTPAEMKTLAGATGLTYKQVKTWFQNRRMKLKRHQRD 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 16/48 (33%)
nanogNP_001091862.1 Homeodomain 196..252 CDD:459649 21/69 (30%)

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