DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and Nkx1-1

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:143 Identity:49/143 - (34%)
Similarity:65/143 - (45%) Gaps:20/143 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RASLPFHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGR 95
            |.:.|..| ..||:.....|.||.|..||..          |:      |:..|..:.:|....|
Mouse   242 RGNSPGAP-GPPATATGAGSAGSTPQGAAVT----------TK------PKRKRTGSDSKSGKPR 289

  Fly    96 LPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKDESC 160
            ..|..||.:||.||||.:|.:.|||..:...||.||.||.|:|||||||||.:.:::....|.|.
Mouse   290 RARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSA 354

  Fly   161 DSTFSSNASSPEP 173
            .   :.....|.|
Mouse   355 P---TGGGGGPGP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 26/48 (54%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 16/65 (25%)
Homeodomain 289..345 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 4/26 (15%)
Blue background indicates that the domain is not in the aligned region.

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