DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and Vax2

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_072159.2 Gene:Vax2 / 64572 RGDID:621133 Length:292 Species:Rattus norvegicus


Alignment Length:161 Identity:49/161 - (30%)
Similarity:71/161 - (44%) Gaps:40/161 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GTNASLGVLQRLRASLPFHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPK----- 78
            ||:||                 .||.  |:||||......|..:.   |..:.......|     
  Rat    48 GTSAS-----------------SPAG--SRESGGDSDGQQALGET---DHCRRILVRDAKGTIRE 90

  Fly    79 --LPRALRQNAPAKRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIW 141
              ||:.|..:.| |||     |..||.:||..||..::...|:...:..:||..|.|:.|:||:|
  Rat    91 IVLPKGLDLDRP-KRT-----RTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVW 149

  Fly   142 FQNRRARERREKREKDESCDSTFSSNASSPE 172
            |||||.     |::||:|.|....:::|:.|
  Rat   150 FQNRRT-----KQKKDQSRDLEKRASSSASE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 17/48 (35%)
Vax2NP_072159.2 vax upstream domain 74..101 5/26 (19%)
homeobox 102..161 27/69 (39%)
Homeodomain 103..159 CDD:459649 25/65 (38%)
vax downstream domain 182..193
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..241
vax terminal domain 266..274
Blue background indicates that the domain is not in the aligned region.

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