DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and hmx2

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001108570.3 Gene:hmx2 / 555632 ZFINID:ZDB-GENE-080506-2 Length:269 Species:Danio rerio


Alignment Length:217 Identity:57/217 - (26%)
Similarity:85/217 - (39%) Gaps:66/217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDFSIEYILNRAGDRYVGTNASLGVLQRLRASLPFHPYAHPASYVS-------KESG------- 51
            :|.|:|:.||..:.|         ||....:.|....|.....|..|       ::||       
Zfish    16 ISSFTIQSILGTSND---------GVRSAGKDSPKSQPRKRTLSVSSEDDCSAGEDSGDCYCSEP 71

  Fly    52 GSPPA-----------SAAEAQIPVYDWLQYTRYH--PPKLP-------RALRQNAPA------- 89
            |.|.:           .|.:..:||.|.:. .|.|  |..||       ||..|.:|.       
Zfish    72 GVPESCNPHQPLNFCLGATKGLLPVQDGID-RRPHLTPSILPDYKEEQGRACSQMSPVSEDRQRD 135

  Fly    90 ----------KRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQN 144
                      |:|     |..|:..|:..||:.:....|||:.:...||.||:||.|:||.||||
Zfish   136 GPDKQNNSAKKKT-----RTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQN 195

  Fly   145 RRARERREKREKDESCDSTFSS 166
            ||.:.:|:...:.|:.:...:|
Zfish   196 RRNKWKRQLSAELEAANMAHAS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 19/48 (40%)
hmx2NP_001108570.3 Homeodomain 146..202 CDD:459649 25/60 (42%)

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