DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and HGTX

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:193 Identity:51/193 - (26%)
Similarity:81/193 - (41%) Gaps:51/193 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TNASLGVLQRLRASLPFHPYAHPAS----YVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKL- 79
            |:|.|..|  ..|.:|....|..|:    |:|:..|.  |.......|     :..|..:.|.| 
  Fly   374 TSAGLSAL--TGAGIPRFSIAAAAAGMAQYLSQSQGA--PLKTHAGHI-----VDRTHLYWPGLQ 429

  Fly    80 -----PRALR---------------QNAPAKRTPGRL--PRIPFTPQQLQALENAYKESNYLSAE 122
                 |.|.|               |:.|:....|:.  .|..|:.||:.|||..::::.||:..
  Fly   430 GLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGP 494

  Fly   123 DANKLADSLELTNTRVKIWFQNRRARERRE--------KREKDE-------SCDSTFSSNASS 170
            :..|||.:|.::.::||:||||||.:.|:.        ||::|:       .|..|..|:..|
  Fly   495 ERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNES 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 17/50 (34%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 5/15 (33%)
Homeodomain 465..523 CDD:459649 21/57 (37%)

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