DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and gsx1

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001012251.1 Gene:gsx1 / 449875 ZFINID:ZDB-GENE-041008-135 Length:243 Species:Danio rerio


Alignment Length:202 Identity:52/202 - (25%)
Similarity:74/202 - (36%) Gaps:61/202 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SLPFHPYA-HPASYVSKESGG-----------------------SPPA-SAAEAQIPVYDWLQY- 71
            |.|..||| ||:..:...|.|                       |||| ...:|..|.:. .|| 
Zfish    23 SPPLFPYAVHPSHPLHSLSAGSCHSRKAGLLCFCPLCVTSQLHPSPPALPLIKASFPAFG-TQYC 86

  Fly    72 ----TRYH-------------------PPKLPRALR----QNAPAKRTPGRLPRIPFTPQQLQAL 109
                :|.|                   |...||...    :|:.::....:..|..||..||..|
Zfish    87 HSALSRQHSTSSGVNLNSGSGLYQAAYPVPDPRQFHCISIENSSSQLQSSKRMRTAFTSTQLLEL 151

  Fly   110 ENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKDE-------SCDSTFSSN 167
            |..:..:.|||.....::|..|.|:..:|||||||||.:.::|.:....       .|.|:.||.
Zfish   152 EREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKSGSHRTGAHNCKCSSSLSSA 216

  Fly   168 ASSPEPE 174
            ..|.|.:
Zfish   217 RCSEEED 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 18/48 (38%)
gsx1NP_001012251.1 Homeodomain 137..193 CDD:459649 22/55 (40%)

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