DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and nkx3-2

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_073777336.1 Gene:nkx3-2 / 337865 ZFINID:ZDB-GENE-030127-1 Length:255 Species:Danio rerio


Alignment Length:93 Identity:33/93 - (35%)
Similarity:48/93 - (51%) Gaps:10/93 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NAPAKRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARER 150
            :||.:|.  :..|..|:..|:..||..:....|||..:...||.||:||.|:|||||||||.:.:
Zfish   124 DAPKQRK--KRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTK 186

  Fly   151 REKREKDESCDSTFSSNASSPEPEMIVV 178
            |.:...|        ..||:|..:.:.|
Zfish   187 RRQMAAD--------LLASAPAAKKVAV 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 20/48 (42%)
nkx3-2XP_073777336.1 None

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