DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and pdx1

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_571518.2 Gene:pdx1 / 30721 ZFINID:ZDB-GENE-990415-122 Length:246 Species:Danio rerio


Alignment Length:136 Identity:42/136 - (30%)
Similarity:60/136 - (44%) Gaps:38/136 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YDWLQYTRYHP---------PKLPRALRQNAPAKRTPGRLPRIPFTPQQLQALENAYKESNYLSA 121
            :.|::.|:.|.         |.:..| .:|   |||     |..:|..||..||..:..:.|:|.
Zfish   109 FPWMKSTKSHTHAWKGQWTGPYMVEA-EEN---KRT-----RTAYTRAQLLELEKEFLFNKYISR 164

  Fly   122 EDANKLADSLELTNTRVKIWFQNRRARERRE--KRE-----------------KDESCDSTFSSN 167
            ....:||.:|.||...:||||||||.:.::|  ||.                 |||||..| ::.
Zfish   165 PRRVELALTLSLTERHIKIWFQNRRMKWKKEEDKRRARGVDPEQDSSITSGDLKDESCVGT-ATL 228

  Fly   168 ASSPEP 173
            |..|.|
Zfish   229 AGPPSP 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 17/48 (35%)
pdx1NP_571518.2 Homeodomain 138..194 CDD:459649 24/60 (40%)

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