DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and nkx2.3

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_571498.1 Gene:nkx2.3 / 30698 ZFINID:ZDB-GENE-990415-178 Length:321 Species:Danio rerio


Alignment Length:162 Identity:46/162 - (28%)
Similarity:72/162 - (44%) Gaps:35/162 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LRASLPFHPYAHPA-------------SYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPR 81
            :.:||....:.|||             .:.:|..|........||::           | ....|
Zfish    83 VESSLSPPMFVHPALGHVDTKLEDELEDHETKSCGAILRTPECEAEV-----------H-SDTER 135

  Fly    82 ALRQNAPAKRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRR 146
            |.||....|      ||:.|:..|:..||..:|:..||||.:...||.:|:||:|:|||||||||
Zfish   136 AQRQRTRRK------PRVLFSQAQVFELERRFKQQRYLSAPEREHLASTLKLTSTQVKIWFQNRR 194

  Fly   147 ARERREKREKDESCDSTFSSNASSPEPEMIVV 178
            .:.:|::::|    ....:.:...|.|..:.|
Zfish   195 YKCKRQRQDK----TLEMAGHHHPPPPRRVAV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 22/48 (46%)
nkx2.3NP_571498.1 Homeodomain 143..199 CDD:459649 27/61 (44%)

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